Analysis of interatomic Contacts of Structural Units in PDB entry:
5H7L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5H7L entry

There are 4 chains in PDB entry 5H7L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 12	PHE 735
B	ILE 11	PRO 733
G	ALA 99	GLY 108
E	LEU 100	GLY 108

There are 58 helices in PDB entry 5H7L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	18	Right-handed 310
Helix 2	AA2	A	20	22	Right-handed 310
Helix 3	AA3	A	36	47	Right-handed alpha
Helix 4	AA4	A	104	115	Right-handed alpha
Helix 5	AA5	A	129	142	Right-handed alpha
Helix 6	AA6	A	152	159	Right-handed alpha
Helix 7	AA7	A	163	186	Right-handed alpha
Helix 8	AA8	A	197	201	Right-handed 310
Helix 9	AA9	A	215	223	Right-handed alpha
Helix 10	AB1	A	225	236	Right-handed alpha
Helix 11	AB2	A	237	243	Right-handed alpha
Helix 12	AB3	A	246	259	Right-handed alpha
Helix 13	AB4	A	261	274	Right-handed alpha
Helix 14	AB5	A	282	287	Right-handed alpha
Helix 15	AB6	A	402	406	Right-handed 310
Helix 16	AB7	A	408	420	Right-handed alpha
Helix 17	AB8	A	440	452	Right-handed alpha
Helix 18	AB9	A	498	507	Right-handed alpha
Helix 19	AC1	A	517	528	Right-handed alpha
Helix 20	AC2	A	531	536	Right-handed alpha
Helix 21	AC3	A	556	574	Right-handed alpha
Helix 22	AC4	A	597	601	Right-handed 310
Helix 23	AC5	A	602	621	Right-handed alpha
Helix 24	AC6	A	640	650	Right-handed alpha
Helix 25	AC7	A	674	676	Right-handed 310
Helix 26	AC8	A	678	688	Right-handed alpha
Helix 27	AC9	A	704	719	Right-handed alpha
Helix 28	AD1	A	727	732	Right-handed alpha
Helix 29	AD2	B	14	19	Right-handed alpha
Helix 30	AD3	B	36	47	Right-handed alpha
Helix 31	AD4	B	107	115	Right-handed alpha
Helix 32	AD5	B	129	142	Right-handed alpha
Helix 33	AD6	B	152	159	Right-handed alpha
Helix 34	AD7	B	163	186	Right-handed alpha
Helix 35	AD8	B	197	201	Right-handed 310
Helix 36	AD9	B	215	223	Right-handed alpha
Helix 37	AE1	B	225	236	Right-handed alpha
Helix 38	AE2	B	237	243	Right-handed alpha
Helix 39	AE3	B	246	259	Right-handed alpha
Helix 40	AE4	B	261	274	Right-handed alpha
Helix 41	AE5	B	282	287	Right-handed alpha
Helix 42	AE6	B	331	333	Right-handed 310
Helix 43	AE7	B	402	404	Right-handed 310
Helix 44	AE8	B	405	420	Right-handed alpha
Helix 45	AE9	B	440	454	Right-handed alpha
Helix 46	AF1	B	498	507	Right-handed alpha
Helix 47	AF2	B	517	528	Right-handed alpha
Helix 48	AF3	B	531	536	Right-handed alpha
Helix 49	AF4	B	556	574	Right-handed alpha
Helix 50	AF5	B	597	601	Right-handed 310
Helix 51	AF6	B	602	620	Right-handed alpha
Helix 52	AF7	B	640	650	Right-handed alpha
Helix 53	AF8	B	674	676	Right-handed 310
Helix 54	AF9	B	678	687	Right-handed alpha
Helix 55	AG1	B	704	719	Right-handed alpha
Helix 56	AG2	B	727	732	Right-handed alpha
Helix 57	AG3	G	101	106	Right-handed alpha
Helix 58	AG4	E	101	106	Right-handed alpha

There are 14 sheets in PDB entry 5H7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	86	first strand
Strand 2	A	89	96	anti-parallel
Strand 3	A	24	31	parallel
Strand 4	A	117	123	parallel
Strand 5	A	145	151	parallel
Strand 6	A	203	207	parallel
Strand 7	A	212	214	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	335	336	first strand
Strand 2	A	327	329	anti-parallel
Strand 3	A	374	376	anti-parallel
Strand 4	A	296	303	anti-parallel
Strand 5	A	311	318	anti-parallel
Strand 6	A	360	363	anti-parallel
Strand 7	A	341	345	anti-parallel
Strand 8	A	348	351	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	425	first strand
Strand 2	A	435	438	anti-parallel
Strand 3	A	394	400	anti-parallel
Strand 4	A	459	461	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	425	first strand
Strand 2	A	435	438	anti-parallel
Strand 3	A	394	400	anti-parallel
Strand 4	A	465	466	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	472	first strand
Strand 2	A	623	637	anti-parallel
Strand 3	A	664	672	anti-parallel
Strand 4	A	654	661	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	472	first strand
Strand 2	A	623	637	anti-parallel
Strand 3	A	692	702	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	479	482	first strand
Strand 2	A	489	496	anti-parallel
Strand 3	A	585	593	anti-parallel
Strand 4	A	545	549	parallel
Strand 5	A	538	542	anti-parallel
Strand 6	A	513	514	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	86	first strand
Strand 2	B	89	96	anti-parallel
Strand 3	B	24	31	parallel
Strand 4	B	117	123	parallel
Strand 5	B	145	151	parallel
Strand 6	B	203	207	parallel
Strand 7	B	212	214	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	337	first strand
Strand 2	B	326	329	anti-parallel
Strand 3	B	374	376	anti-parallel
Strand 4	B	296	302	anti-parallel
Strand 5	B	312	318	anti-parallel
Strand 6	B	360	363	anti-parallel
Strand 7	B	341	342	anti-parallel
Strand 8	B	351	352	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	426	first strand
Strand 2	B	434	438	anti-parallel
Strand 3	B	394	400	anti-parallel
Strand 4	B	459	461	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	426	first strand
Strand 2	B	434	438	anti-parallel
Strand 3	B	394	400	anti-parallel
Strand 4	B	465	466	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	469	472	first strand
Strand 2	B	623	637	anti-parallel
Strand 3	B	664	672	anti-parallel
Strand 4	B	654	661	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	469	472	first strand
Strand 2	B	623	637	anti-parallel
Strand 3	B	692	702	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	482	first strand
Strand 2	B	489	496	anti-parallel
Strand 3	B	585	593	anti-parallel
Strand 4	B	545	549	parallel
Strand 5	B	538	541	anti-parallel
Strand 6	B	513	514	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5H7L

Analysis of interatomic Contacts of Structural Units in PDB entry:
5H7L