Analysis of interatomic Contacts of Structural Units in PDB entry:
5H7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H7W entry

There are 2 chains in PDB entry 5H7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 26SER 553
B
 GLY 26LEU 554
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5H7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 75Right-handed alpha
Helix 2
AA2
A
90 97Right-handed alpha
Helix 3
AA3
A
98 108Right-handed alpha
Helix 4
AA4
A
116 121Right-handed 310
Helix 5
AA5
A
122 129Right-handed alpha
Helix 6
AA6
A
130 135Right-handed alpha
Helix 7
AA7
A
150 157Right-handed alpha
Helix 8
AA8
A
180 185Right-handed alpha
Helix 9
AA9
A
195 210Right-handed alpha
Helix 10
AB1
A
222 233Right-handed alpha
Helix 11
AB2
A
317 336Right-handed alpha
Helix 12
AB3
A
349 354Right-handed alpha
Helix 13
AB4
A
358 372Right-handed alpha
Helix 14
AB5
A
392 394Right-handed 310
Helix 15
AB6
A
408 416Right-handed alpha
Helix 16
AB7
A
429 441Right-handed alpha
Helix 17
AB8
A
500 504Right-handed alpha
Helix 18
AB9
A
505 513Right-handed 310
Helix 19
AC1
A
525 537Right-handed alpha
Helix 20
AC2
B
60 75Right-handed alpha
Helix 21
AC3
B
90 97Right-handed alpha
Helix 22
AC4
B
98 108Right-handed alpha
Helix 23
AC5
B
116 121Right-handed 310
Helix 24
AC6
B
122 129Right-handed alpha
Helix 25
AC7
B
130 135Right-handed alpha
Helix 26
AC8
B
148 156Right-handed alpha
Helix 27
AC9
B
180 185Right-handed alpha
Helix 28
AD1
B
195 210Right-handed alpha
Helix 29
AD2
B
222 233Right-handed alpha
Helix 30
AD3
B
317 337Right-handed alpha
Helix 31
AD4
B
349 354Right-handed alpha
Helix 32
AD5
B
358 372Right-handed alpha
Helix 33
AD6
B
392 394Right-handed 310
Helix 34
AD7
B
408 416Right-handed alpha
Helix 35
AD8
B
429 442Right-handed alpha
Helix 36
AD9
B
500 504Right-handed alpha
Helix 37
AE1
B
505 513Right-handed 310
Helix 38
AE2
B
524 537Right-handed alpha
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There are 16 sheets in PDB entry 5H7W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
139 140parallel
Strand 3
A
112 114parallel
Strand 4
A
78 82parallel
Strand 5
A
27 35parallel
Strand 6
A
286 295anti-parallel
Strand 7
A
300 305anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
139 140parallel
Strand 3
A
112 114parallel
Strand 4
A
78 82parallel
Strand 5
A
27 35parallel
Strand 6
A
286 295anti-parallel
Strand 7
A
308 309anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
191 193anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 166first strand
Strand 2
A
169 177anti-parallel
Strand 3
A
215 220parallel
Strand 4
A
238 240parallel
Strand 5
A
274 278parallel
Strand 6
A
265 268anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 407first strand
Strand 2
A
340 342anti-parallel
Strand 3
A
538 539parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
A
451 454anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
493 499first strand
Strand 2
A
421 428anti-parallel
Strand 3
A
519 524anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
485 487first strand
Strand 2
A
470 476anti-parallel
Strand 3
A
456 460anti-parallel
Strand 4
A
547 549parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
112 114parallel
Strand 3
B
78 82parallel
Strand 4
B
28 35parallel
Strand 5
B
286 294anti-parallel
Strand 6
B
300 305anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
112 114parallel
Strand 3
B
78 82parallel
Strand 4
B
28 35parallel
Strand 5
B
286 294anti-parallel
Strand 6
B
308 309anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 146first strand
Strand 2
B
191 193anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 166first strand
Strand 2
B
169 177anti-parallel
Strand 3
B
215 220parallel
Strand 4
B
238 240parallel
Strand 5
B
274 278parallel
Strand 6
B
265 268anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
406 407first strand
Strand 2
B
340 342anti-parallel
Strand 3
B
538 539parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 390first strand
Strand 2
B
451 454anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
493 499first strand
Strand 2
B
422 428anti-parallel
Strand 3
B
519 520anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
485 487first strand
Strand 2
B
470 476anti-parallel
Strand 3
B
456 460anti-parallel
Strand 4
B
547 549parallel
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