Analysis of interatomic Contacts of Structural Units in PDB entry:
5H92

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5H92 entry

There are 3 chains in PDB entry 5H92 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 63	ALA 629
B	LYS 63	ALA 634
C	ALA 1	THR 96

There are 54 helices in PDB entry 5H92. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	73	Right-handed alpha
Helix 2	AA2	A	80	85	Right-handed alpha
Helix 3	AA3	A	93	101	Right-handed alpha
Helix 4	AA4	A	127	129	Right-handed 310
Helix 5	AA5	A	133	148	Right-handed alpha
Helix 6	AA6	A	166	168	Right-handed 310
Helix 7	AA7	A	169	179	Right-handed alpha
Helix 8	AA8	A	204	221	Right-handed alpha
Helix 9	AA9	A	226	233	Right-handed alpha
Helix 10	AB1	A	244	253	Right-handed alpha
Helix 11	AB2	A	290	294	Right-handed 310
Helix 12	AB3	A	343	359	Right-handed alpha
Helix 13	AB4	A	363	367	Right-handed 310
Helix 14	AB5	A	368	377	Right-handed alpha
Helix 15	AB6	A	377	390	Right-handed alpha
Helix 16	AB7	A	424	426	Right-handed 310
Helix 17	AB8	A	430	444	Right-handed alpha
Helix 18	AB9	A	462	464	Right-handed 310
Helix 19	AC1	A	465	476	Right-handed alpha
Helix 20	AC2	A	480	484	Right-handed 310
Helix 21	AC3	A	485	491	Right-handed alpha
Helix 22	AC4	A	507	526	Right-handed alpha
Helix 23	AC5	A	546	550	Right-handed 310
Helix 24	AC6	A	587	603	Right-handed alpha
Helix 25	AC7	A	608	617	Right-handed alpha
Helix 26	AC8	A	617	629	Right-handed alpha
Helix 27	AC9	B	65	73	Right-handed alpha
Helix 28	AD1	B	80	86	Right-handed alpha
Helix 29	AD2	B	93	101	Right-handed alpha
Helix 30	AD3	B	127	129	Right-handed 310
Helix 31	AD4	B	133	147	Right-handed alpha
Helix 32	AD5	B	166	179	Right-handed alpha
Helix 33	AD6	B	204	221	Right-handed alpha
Helix 34	AD7	B	226	233	Right-handed alpha
Helix 35	AD8	B	244	253	Right-handed alpha
Helix 36	AD9	B	290	294	Right-handed 310
Helix 37	AE1	B	343	359	Right-handed alpha
Helix 38	AE2	B	363	367	Right-handed 310
Helix 39	AE3	B	368	377	Right-handed alpha
Helix 40	AE4	B	377	390	Right-handed alpha
Helix 41	AE5	B	424	426	Right-handed 310
Helix 42	AE6	B	430	444	Right-handed alpha
Helix 43	AE7	B	462	464	Right-handed 310
Helix 44	AE8	B	465	476	Right-handed alpha
Helix 45	AE9	B	480	484	Right-handed 310
Helix 46	AF1	B	485	490	Right-handed alpha
Helix 47	AF2	B	507	526	Right-handed alpha
Helix 48	AF3	B	546	550	Right-handed 310
Helix 49	AF4	B	587	603	Right-handed alpha
Helix 50	AF5	B	608	617	Right-handed alpha
Helix 51	AF6	B	617	629	Right-handed alpha
Helix 52	AF7	C	23	32	Right-handed alpha
Helix 53	AF8	C	65	71	Right-handed alpha
Helix 54	AF9	C	77	79	Right-handed 310

There are 10 sheets in PDB entry 5H92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	109	first strand
Strand 2	A	119	124	anti-parallel
Strand 3	A	160	165	anti-parallel
Strand 4	A	152	154	anti-parallel
Strand 5	A	428	429	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	132	first strand
Strand 2	A	448	450	anti-parallel
Strand 3	A	456	461	anti-parallel
Strand 4	A	418	422	anti-parallel
Strand 5	A	409	412	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	283	first strand
Strand 2	A	296	302	parallel
Strand 3	A	308	315	anti-parallel
Strand 4	A	334	340	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	492	493	first strand
Strand 2	A	535	538	parallel
Strand 3	A	552	558	parallel
Strand 4	A	561	566	anti-parallel
Strand 5	A	577	584	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	108	first strand
Strand 2	B	120	124	anti-parallel
Strand 3	B	160	165	anti-parallel
Strand 4	B	152	154	anti-parallel
Strand 5	B	428	429	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	132	first strand
Strand 2	B	448	450	anti-parallel
Strand 3	B	456	461	anti-parallel
Strand 4	B	418	422	anti-parallel
Strand 5	B	409	412	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	283	first strand
Strand 2	B	296	302	parallel
Strand 3	B	308	315	anti-parallel
Strand 4	B	334	340	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	492	493	first strand
Strand 2	B	535	538	parallel
Strand 3	B	552	558	parallel
Strand 4	B	561	566	anti-parallel
Strand 5	B	577	584	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	19	first strand
Strand 2	C	2	8	anti-parallel
Strand 3	C	85	88	parallel
Strand 4	C	48	53	anti-parallel
Strand 5	C	73	75	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	57	first strand
Strand 2	C	80	81	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5H92

Analysis of interatomic Contacts of Structural Units in PDB entry:
5H92