Analysis of interatomic Contacts of Structural Units in PDB entry:
5HA5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HA5 entry

There are 4 chains in PDB entry 5HA5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 9ALA 258
B
 MET 9ALA 258
C
 MET 9ALA 258
D
 MET 9ALA 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 5HA5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 37Right-handed alpha
Helix 2
AA2
A
47 61Right-handed alpha
Helix 3
AA3
A
74 90Right-handed alpha
Helix 4
AA4
A
111 124Right-handed alpha
Helix 5
AA5
A
124 142Right-handed alpha
Helix 6
AA6
A
150 154Right-handed 310
Helix 7
AA7
A
160 182Right-handed alpha
Helix 8
AA8
A
183 185Right-handed 310
Helix 9
AA9
A
196 201Right-handed 310
Helix 10
AB1
A
202 206Right-handed 310
Helix 11
AB2
A
211 216Right-handed alpha
Helix 12
AB3
A
226 237Right-handed alpha
Helix 13
AB4
A
238 242Right-handed 310
Helix 14
AB5
A
254 258Right-handed 310
Helix 15
AB6
B
24 37Right-handed alpha
Helix 16
AB7
B
47 61Right-handed alpha
Helix 17
AB8
B
74 90Right-handed alpha
Helix 18
AB9
B
111 124Right-handed alpha
Helix 19
AC1
B
124 134Right-handed alpha
Helix 20
AC2
B
134 142Right-handed alpha
Helix 21
AC3
B
150 154Right-handed 310
Helix 22
AC4
B
160 182Right-handed alpha
Helix 23
AC5
B
183 185Right-handed 310
Helix 24
AC6
B
212 216Right-handed alpha
Helix 25
AC7
B
226 238Right-handed alpha
Helix 26
AC8
B
239 242Right-handed 310
Helix 27
AC9
B
254 258Right-handed 310
Helix 28
AD1
C
24 37Right-handed alpha
Helix 29
AD2
C
47 61Right-handed alpha
Helix 30
AD3
C
74 90Right-handed alpha
Helix 31
AD4
C
110 124Right-handed alpha
Helix 32
AD5
C
124 134Right-handed alpha
Helix 33
AD6
C
134 142Right-handed alpha
Helix 34
AD7
C
150 154Right-handed 310
Helix 35
AD8
C
160 182Right-handed alpha
Helix 36
AD9
C
183 185Right-handed 310
Helix 37
AE1
C
212 216Right-handed alpha
Helix 38
AE2
C
226 238Right-handed alpha
Helix 39
AE3
C
239 242Right-handed 310
Helix 40
AE4
C
254 258Right-handed 310
Helix 41
AE5
D
24 37Right-handed alpha
Helix 42
AE6
D
47 61Right-handed alpha
Helix 43
AE7
D
74 90Right-handed alpha
Helix 44
AE8
D
111 124Right-handed alpha
Helix 45
AE9
D
124 134Right-handed alpha
Helix 46
AF1
D
134 142Right-handed alpha
Helix 47
AF2
D
150 154Right-handed 310
Helix 48
AF3
D
160 182Right-handed alpha
Helix 49
AF4
D
183 185Right-handed 310
Helix 50
AF5
D
211 216Right-handed alpha
Helix 51
AF6
D
226 238Right-handed alpha
Helix 52
AF7
D
239 242Right-handed 310
Helix 53
AF8
D
254 258Right-handed 310
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There are 4 sheets in PDB entry 5HA5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 69first strand
Strand 2
A
40 45parallel
Strand 3
A
16 19parallel
Strand 4
A
94 97parallel
Strand 5
A
144 148parallel
Strand 6
A
187 193parallel
Strand 7
A
248 251parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 69first strand
Strand 2
B
40 45parallel
Strand 3
B
16 20parallel
Strand 4
B
94 97parallel
Strand 5
B
144 148parallel
Strand 6
B
187 193parallel
Strand 7
B
248 251parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 69first strand
Strand 2
C
40 45parallel
Strand 3
C
16 20parallel
Strand 4
C
94 97parallel
Strand 5
C
144 148parallel
Strand 6
C
187 193parallel
Strand 7
C
248 251parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
65 69first strand
Strand 2
D
40 45parallel
Strand 3
D
16 20parallel
Strand 4
D
94 97parallel
Strand 5
D
144 148parallel
Strand 6
D
187 193parallel
Strand 7
D
248 251parallel
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