Analysis of interatomic Contacts of Structural Units in PDB entry:
5HAB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HAB entry

There are 4 chains in PDB entry 5HAB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -19ASP 448
B
 HIS -14ASP 448
C
 A 1 A 5
D
 A 1 A 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 5HAB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 42Right-handed alpha
Helix 2
AA2
A
52 60Right-handed alpha
Helix 3
AA3
A
64 71Right-handed 310
Helix 4
AA4
A
84 89Right-handed alpha
Helix 5
AA5
A
90 95Right-handed alpha
Helix 6
AA6
A
96 98Right-handed 310
Helix 7
AA7
A
105 117Right-handed alpha
Helix 8
AA8
A
188 199Right-handed alpha
Helix 9
AA9
A
218 232Right-handed alpha
Helix 10
AB1
A
248 262Right-handed alpha
Helix 11
AB2
A
270 283Right-handed alpha
Helix 12
AB3
A
297 310Right-handed alpha
Helix 13
AB4
A
312 314Right-handed 310
Helix 14
AB5
A
329 336Right-handed alpha
Helix 15
AB6
A
358 375Right-handed alpha
Helix 16
AB7
A
390 402Right-handed alpha
Helix 17
AB8
A
412 426Right-handed alpha
Helix 18
AB9
B
37 42Right-handed alpha
Helix 19
AC1
B
52 60Right-handed alpha
Helix 20
AC2
B
64 71Right-handed 310
Helix 21
AC3
B
84 89Right-handed alpha
Helix 22
AC4
B
90 95Right-handed alpha
Helix 23
AC5
B
96 98Right-handed 310
Helix 24
AC6
B
105 117Right-handed alpha
Helix 25
AC7
B
188 199Right-handed alpha
Helix 26
AC8
B
218 232Right-handed alpha
Helix 27
AC9
B
248 262Right-handed alpha
Helix 28
AD1
B
270 283Right-handed alpha
Helix 29
AD2
B
297 310Right-handed alpha
Helix 30
AD3
B
312 314Right-handed 310
Helix 31
AD4
B
329 336Right-handed alpha
Helix 32
AD5
B
358 375Right-handed alpha
Helix 33
AD6
B
390 402Right-handed alpha
Helix 34
AD7
B
412 426Right-handed alpha
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There are 6 sheets in PDB entry 5HAB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
102 104parallel
Strand 3
A
74 79parallel
Strand 4
A
27 31parallel
Strand 5
A
19 24anti-parallel
Strand 6
A
4 10anti-parallel
Strand 7
A
441 445anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 140first strand
Strand 2
A
143 150anti-parallel
Strand 3
A
157 164anti-parallel
Strand 4
A
167 172anti-parallel
Strand 5
A
200 206parallel
Strand 6
A
405 409parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
265 269parallel
Strand 3
A
316 320parallel
Strand 4
A
240 244parallel
Strand 5
A
348 352parallel
Strand 6
A
378 380parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 130first strand
Strand 2
B
102 104parallel
Strand 3
B
74 79parallel
Strand 4
B
27 31parallel
Strand 5
B
19 24anti-parallel
Strand 6
B
2 10anti-parallel
Strand 7
B
442 447anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
144 150anti-parallel
Strand 3
B
157 164anti-parallel
Strand 4
B
167 172anti-parallel
Strand 5
B
200 206parallel
Strand 6
B
405 409parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 295first strand
Strand 2
B
265 269parallel
Strand 3
B
316 320parallel
Strand 4
B
240 244parallel
Strand 5
B
348 352parallel
Strand 6
B
378 380parallel
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