Analysis of interatomic Contacts of Structural Units in PDB entry:
5HB1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HB1 entry

There is 1 chain in PDB entry 5HB1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 574ASP 1402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 40 helices in PDB entry 5HB1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
574 606Right-handed alpha
Helix 2
AA2
A
606 619Right-handed alpha
Helix 3
AA3
A
636 648Right-handed alpha
Helix 4
AA4
A
670 684Right-handed alpha
Helix 5
AA5
A
706 726Right-handed alpha
Helix 6
AA6
A
748 780Right-handed alpha
Helix 7
AA7
A
781 788Right-handed alpha
Helix 8
AA8
A
790 799Right-handed alpha
Helix 9
AA9
A
801 808Right-handed alpha
Helix 10
AB1
A
808 830Right-handed alpha
Helix 11
AB2
A
832 843Right-handed alpha
Helix 12
AB3
A
849 868Right-handed alpha
Helix 13
AB4
A
874 889Right-handed alpha
Helix 14
AB5
A
894 908Right-handed alpha
Helix 15
AB6
A
910 925Right-handed alpha
Helix 16
AB7
A
930 938Right-handed alpha
Helix 17
AB8
A
944 946Right-handed 310
Helix 18
AB9
A
947 970Right-handed alpha
Helix 19
AC1
A
984 997Right-handed alpha
Helix 20
AC2
A
1000 1014Right-handed alpha
Helix 21
AC3
A
1016 1023Right-handed alpha
Helix 22
AC4
A
1027 1039Right-handed alpha
Helix 23
AC5
A
1039 1054Right-handed alpha
Helix 24
AC6
A
1055 1068Right-handed alpha
Helix 25
AC7
A
1074 1089Right-handed alpha
Helix 26
AC8
A
1097 1127Right-handed alpha
Helix 27
AC9
A
1132 1143Right-handed alpha
Helix 28
AD1
A
1149 1157Right-handed alpha
Helix 29
AD2
A
1157 1162Right-handed alpha
Helix 30
AD3
A
1163 1175Right-handed alpha
Helix 31
AD4
A
1178 1206Right-handed alpha
Helix 32
AD5
A
1226 1242Right-handed alpha
Helix 33
AD6
A
1250 1265Right-handed alpha
Helix 34
AD7
A
1268 1272Right-handed 310
Helix 35
AD8
A
1276 1285Right-handed alpha
Helix 36
AD9
A
1288 1303Right-handed alpha
Helix 37
AE1
A
1308 1310Right-handed 310
Helix 38
AE2
A
1311 1334Right-handed alpha
Helix 39
AE3
A
1352 1373Right-handed alpha
Helix 40
AE4
A
1387 1402Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 5HB1.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
693 696first strand
Strand 2
A
700 703anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il