Analysis of interatomic Contacts of Structural Units in PDB entry:
5HB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HB2 entry

There is 1 chain in PDB entry 5HB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
ASP 392SER 1110
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5HB2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
C
393 416Right-handed alpha
Helix 2
AA2
C
420 431Right-handed alpha
Helix 3
AA3
C
436 452Right-handed alpha
Helix 4
AA4
C
466 472Right-handed alpha
Helix 5
AA5
C
477 508Right-handed alpha
Helix 6
AA6
C
521 536Right-handed alpha
Helix 7
AA7
C
553 564Right-handed alpha
Helix 8
AA8
C
567 577Right-handed alpha
Helix 9
AA9
C
577 585Right-handed alpha
Helix 10
AB1
C
587 598Right-handed alpha
Helix 11
AB2
C
604 619Right-handed alpha
Helix 12
AB3
C
628 640Right-handed alpha
Helix 13
AB4
C
654 665Right-handed alpha
Helix 14
AB5
C
681 697Right-handed alpha
Helix 15
AB6
C
708 719Right-handed alpha
Helix 16
AB7
C
721 730Right-handed alpha
Helix 17
AB8
C
733 748Right-handed alpha
Helix 18
AB9
C
774 784Right-handed alpha
Helix 19
AC1
C
790 800Right-handed alpha
Helix 20
AC2
C
801 810Right-handed 310
Helix 21
AC3
C
812 830Right-handed alpha
Helix 22
AC4
C
832 837Right-handed alpha
Helix 23
AC5
C
849 854Right-handed alpha
Helix 24
AC6
C
854 859Right-handed alpha
Helix 25
AC7
C
864 880Right-handed alpha
Helix 26
AC8
C
883 894Right-handed alpha
Helix 27
AC9
C
896 913Right-handed alpha
Helix 28
AD1
C
945 949Right-handed 310
Helix 29
AD2
C
953 968Right-handed alpha
Helix 30
AD3
C
968 973Right-handed alpha
Helix 31
AD4
C
976 999Right-handed alpha
Helix 32
AD5
C
1000 1012Right-handed alpha
Helix 33
AD6
C
1015 1019Right-handed 310
Helix 34
AD7
C
1021 1031Right-handed alpha
Helix 35
AD8
C
1036 1041Right-handed alpha
Helix 36
AD9
C
1042 1064Right-handed alpha
Helix 37
AE1
C
1070 1094Right-handed alpha
Helix 38
AE2
C
1101 1109Right-handed alpha
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There are 2 sheets in PDB entry 5HB2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
763 765first strand
Strand 2
C
771 773anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
838 840first strand
Strand 2
C
846 848anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il