Analysis of interatomic Contacts of Structural Units in PDB entry:
5HB6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HB6 entry

There are 2 chains in PDB entry 5HB6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 857ALA 994
B
 SER 857GLY 999
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5HB6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
865 871Right-handed alpha
Helix 2
AA2
A
873 878Right-handed alpha
Helix 3
AA3
A
905 909Right-handed 310
Helix 4
AA4
A
926 930Right-handed 310
Helix 5
AA5
A
957 970Right-handed alpha
Helix 6
AA6
B
865 872Right-handed alpha
Helix 7
AA7
B
873 878Right-handed alpha
Helix 8
AA8
B
926 930Right-handed 310
Helix 9
AA9
B
958 969Right-handed alpha
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There are 4 sheets in PDB entry 5HB6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
860 863first strand
Strand 2
A
884 887anti-parallel
Strand 3
A
891 895anti-parallel
Strand 4
A
941 945anti-parallel
Strand 5
A
985 990anti-parallel
Strand 6
A
975 980anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
914 917first strand
Strand 2
A
920 923anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
860 863first strand
Strand 2
B
884 887anti-parallel
Strand 3
B
891 895anti-parallel
Strand 4
B
941 945anti-parallel
Strand 5
B
985 990anti-parallel
Strand 6
B
975 980anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
914 917first strand
Strand 2
B
920 923anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il