Analysis of interatomic Contacts of Structural Units in PDB entry:
5HC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HC0 entry

There is 1 chain in PDB entry 5HC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4GLY 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5HC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 20Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
42 58Right-handed alpha
Helix 4
AA4
A
117 129Right-handed alpha
Helix 5
AA5
A
155 171Right-handed alpha
Helix 6
AA6
A
171 176Right-handed alpha
Helix 7
AA7
A
188 205Right-handed alpha
Helix 8
AA8
A
206 210Right-handed 310
Helix 9
AA9
A
229 235Right-handed alpha
Helix 10
AB1
A
245 258Right-handed alpha
Helix 11
AB2
A
264 268Right-handed 310
Helix 12
AB3
A
269 274Right-handed alpha
Helix 13
AB4
A
289 303Right-handed alpha
Helix 14
AB5
A
318 322Right-handed 310
Helix 15
AB6
A
326 343Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5HC0.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 78first strand
Strand 2
A
85 93anti-parallel
Strand 3
A
133 138anti-parallel
Strand 4
A
99 105parallel
Strand 5
A
177 187parallel
Strand 6
A
212 216parallel
Strand 7
A
279 286parallel
Strand 8
A
307 316parallel
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