Analysis of interatomic Contacts of Structural Units in PDB entry:
5HC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HC8 entry

There is 1 chain in PDB entry 5HC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 64GLU 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5HC8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 86Right-handed alpha
Helix 2
AA2
A
88 110Right-handed alpha
Helix 3
AA3
A
122 127Right-handed 310
Helix 4
AA4
A
128 145Right-handed alpha
Helix 5
AA5
A
145 153Right-handed alpha
Helix 6
AA6
A
164 168Right-handed 310
Helix 7
AA7
A
169 184Right-handed alpha
Helix 8
AA8
A
198 216Right-handed alpha
Helix 9
AA9
A
220 224Right-handed 310
Helix 10
AB1
A
225 232Right-handed alpha
Helix 11
AB2
A
233 238Right-handed 310
Helix 12
AB3
A
274 278Right-handed 310
Helix 13
AB4
A
279 293Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5HC8.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
190 195parallel
Strand 3
A
114 120parallel
Strand 4
A
70 74parallel
Strand 5
A
245 248parallel
Strand 6
A
267 270parallel
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