Analysis of interatomic Contacts of Structural Units in PDB entry:
5HE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HE9 entry

There are 2 chains in PDB entry 5HE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 133GLY 300
E
 SER -3TYR 52
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5HE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
133 153Right-handed alpha
Helix 2
AA2
A
169 184Right-handed alpha
Helix 3
AA3
A
193 203Right-handed alpha
Helix 4
AA4
A
207 217Right-handed alpha
Helix 5
AA5
A
233 240Right-handed alpha
Helix 6
AA6
A
240 251Right-handed alpha
Helix 7
AA7
A
262 271Right-handed alpha
Helix 8
AA8
A
275 292Right-handed alpha
Helix 9
AA9
E
-2 12Right-handed alpha
Helix 10
AB1
E
14 26Right-handed alpha
Helix 11
AB2
E
28 44Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5HE9.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 297first strand
Strand 2
A
159 163parallel
Strand 3
A
255 259parallel
Strand 4
A
222 225parallel
Strand 5
A
189 192parallel
Strand 6
E
49 51anti-parallel
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