Analysis of interatomic Contacts of Structural Units in PDB entry:
5HEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HEV entry

There are 4 chains in PDB entry 5HEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 208
F
 MET 1LYS 210
B
 MET 1VAL 209
C
 MET 1LYS 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 5HEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 22Right-handed alpha
Helix 2
AA2
A
35 47Right-handed alpha
Helix 3
AA3
A
61 73Right-handed alpha
Helix 4
AA4
A
86 96Right-handed alpha
Helix 5
AA5
A
107 120Right-handed alpha
Helix 6
AA6
A
126 139Right-handed alpha
Helix 7
AA7
A
152 161Right-handed alpha
Helix 8
AA8
A
165 173Right-handed alpha
Helix 9
AA9
A
176 191Right-handed alpha
Helix 10
AB1
A
196 206Right-handed alpha
Helix 11
AB2
F
10 21Right-handed alpha
Helix 12
AB3
F
35 47Right-handed alpha
Helix 13
AB4
F
61 73Right-handed alpha
Helix 14
AB5
F
86 96Right-handed alpha
Helix 15
AB6
F
107 119Right-handed alpha
Helix 16
AB7
F
126 138Right-handed alpha
Helix 17
AB8
F
144 149Right-handed 310
Helix 18
AB9
F
150 161Right-handed alpha
Helix 19
AC1
F
165 174Right-handed alpha
Helix 20
AC2
F
176 191Right-handed alpha
Helix 21
AC3
F
195 206Right-handed alpha
Helix 22
AC4
B
10 23Right-handed alpha
Helix 23
AC5
B
35 47Right-handed alpha
Helix 24
AC6
B
61 73Right-handed alpha
Helix 25
AC7
B
86 96Right-handed alpha
Helix 26
AC8
B
107 120Right-handed alpha
Helix 27
AC9
B
126 139Right-handed alpha
Helix 28
AD1
B
150 162Right-handed alpha
Helix 29
AD2
B
165 174Right-handed alpha
Helix 30
AD3
B
176 191Right-handed alpha
Helix 31
AD4
B
195 206Right-handed alpha
Helix 32
AD5
C
10 21Right-handed alpha
Helix 33
AD6
C
35 47Right-handed alpha
Helix 34
AD7
C
61 71Right-handed alpha
Helix 35
AD8
C
86 96Right-handed alpha
Helix 36
AD9
C
108 120Right-handed alpha
Helix 37
AE1
C
126 138Right-handed alpha
Helix 38
AE2
C
150 161Right-handed alpha
Helix 39
AE3
C
165 174Right-handed alpha
Helix 40
AE4
C
176 191Right-handed alpha
Helix 41
AE5
C
195 206Right-handed alpha
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There are 4 sheets in PDB entry 5HEV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 33first strand
Strand 2
A
2 7parallel
Strand 3
A
50 53parallel
Strand 4
A
77 82parallel
Strand 5
A
100 103parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
27 31first strand
Strand 2
F
2 7parallel
Strand 3
F
50 53parallel
Strand 4
F
77 82parallel
Strand 5
F
100 103parallel
Strand 6
F
124 125parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 33first strand
Strand 2
B
2 7parallel
Strand 3
B
50 53parallel
Strand 4
B
78 82parallel
Strand 5
B
100 103parallel
Strand 6
B
124 125parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 33first strand
Strand 2
C
2 7parallel
Strand 3
C
51 53parallel
Strand 4
C
78 82parallel
Strand 5
C
100 103parallel
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