Analysis of interatomic Contacts of Structural Units in PDB entry:
5HEX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HEX entry

There are 2 chains in PDB entry 5HEX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 17ILE 911
B
ASP 17GLU 913
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 5HEX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
17 26Right-handed alpha
Helix 2
AA2
A
27 30Right-handed 310
Helix 3
AA3
A
32 52Right-handed alpha
Helix 4
AA4
A
123 141Right-handed alpha
Helix 5
AA5
A
184 197Right-handed alpha
Helix 6
AA6
A
209 221Right-handed alpha
Helix 7
AA7
A
243 245Right-handed 310
Helix 8
AA8
A
260 264Right-handed 310
Helix 9
AA9
A
275 284Right-handed alpha
Helix 10
AB1
A
293 298Right-handed alpha
Helix 11
AB2
A
301 316Right-handed alpha
Helix 12
AB3
A
319 323Right-handed 310
Helix 13
AB4
A
335 345Right-handed alpha
Helix 14
AB5
A
347 359Right-handed alpha
Helix 15
AB6
A
364 402Right-handed alpha
Helix 16
AB7
A
414 420Right-handed alpha
Helix 17
AB8
A
422 435Right-handed alpha
Helix 18
AB9
A
448 475Right-handed alpha
Helix 19
AC1
A
476 478Right-handed 310
Helix 20
AC2
A
480 500Right-handed alpha
Helix 21
AC3
A
563 569Right-handed alpha
Helix 22
AC4
A
570 589Right-handed alpha
Helix 23
AC5
A
632 643Right-handed alpha
Helix 24
AC6
A
656 667Right-handed alpha
Helix 25
AC7
A
708 712Right-handed 310
Helix 26
AC8
A
723 733Right-handed alpha
Helix 27
AC9
A
739 746Right-handed alpha
Helix 28
AD1
A
748 764Right-handed alpha
Helix 29
AD2
A
767 771Right-handed 310
Helix 30
AD3
A
783 793Right-handed alpha
Helix 31
AD4
A
797 807Right-handed alpha
Helix 32
AD5
A
812 850Right-handed alpha
Helix 33
AD6
A
862 868Right-handed alpha
Helix 34
AD7
A
870 883Right-handed alpha
Helix 35
AD8
A
899 909Right-handed alpha
Helix 36
AD9
B
18 26Right-handed alpha
Helix 37
AE1
B
27 30Right-handed 310
Helix 38
AE2
B
32 52Right-handed alpha
Helix 39
AE3
B
55 59Right-handed 310
Helix 40
AE4
B
115 121Right-handed alpha
Helix 41
AE5
B
122 141Right-handed alpha
Helix 42
AE6
B
184 197Right-handed alpha
Helix 43
AE7
B
209 221Right-handed alpha
Helix 44
AE8
B
243 245Right-handed 310
Helix 45
AE9
B
260 264Right-handed 310
Helix 46
AF1
B
275 284Right-handed alpha
Helix 47
AF2
B
291 298Right-handed alpha
Helix 48
AF3
B
301 316Right-handed alpha
Helix 49
AF4
B
319 323Right-handed 310
Helix 50
AF5
B
335 343Right-handed alpha
Helix 51
AF6
B
348 359Right-handed alpha
Helix 52
AF7
B
364 402Right-handed alpha
Helix 53
AF8
B
414 420Right-handed alpha
Helix 54
AF9
B
422 435Right-handed alpha
Helix 55
AG1
B
448 476Right-handed alpha
Helix 56
AG2
B
480 500Right-handed alpha
Helix 57
AG3
B
503 507Right-handed 310
Helix 58
AG4
B
563 568Right-handed alpha
Helix 59
AG5
B
570 588Right-handed alpha
Helix 60
AG6
B
632 644Right-handed alpha
Helix 61
AG7
B
656 669Right-handed alpha
Helix 62
AG8
B
708 712Right-handed 310
Helix 63
AG9
B
718 722Right-handed 310
Helix 64
AH1
B
723 732Right-handed alpha
Helix 65
AH2
B
739 746Right-handed alpha
Helix 66
AH3
B
748 764Right-handed alpha
Helix 67
AH4
B
767 771Right-handed 310
Helix 68
AH5
B
774 778Right-handed 310
Helix 69
AH6
B
783 793Right-handed alpha
Helix 70
AH7
B
797 807Right-handed alpha
Helix 71
AH8
B
812 849Right-handed alpha
Helix 72
AH9
B
862 868Right-handed alpha
Helix 73
AI1
B
870 883Right-handed alpha
Helix 74
AI2
B
898 913Right-handed alpha
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There are 10 sheets in PDB entry 5HEX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
64 65first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
234 241anti-parallel
Strand 4
A
224 230anti-parallel
Strand 5
A
406 413parallel
Strand 6
A
438 444parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
106 112first strand
Strand 2
A
90 97anti-parallel
Strand 3
A
78 85anti-parallel
Strand 4
A
150 154parallel
Strand 5
A
204 208parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
512 513first strand
Strand 2
A
702 706anti-parallel
Strand 3
A
682 689anti-parallel
Strand 4
A
672 678anti-parallel
Strand 5
A
854 861parallel
Strand 6
A
886 892parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
552 561first strand
Strand 2
A
537 546anti-parallel
Strand 3
A
526 533anti-parallel
Strand 4
A
597 602parallel
Strand 5
A
650 655parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
606 610first strand
Strand 2
A
613 616anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
64 65first strand
Strand 2
B
254 258anti-parallel
Strand 3
B
234 241anti-parallel
Strand 4
B
224 230anti-parallel
Strand 5
B
406 413parallel
Strand 6
B
438 444parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
105 113first strand
Strand 2
B
89 97anti-parallel
Strand 3
B
78 86anti-parallel
Strand 4
B
150 154parallel
Strand 5
B
204 208parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
512 513first strand
Strand 2
B
702 706anti-parallel
Strand 3
B
682 689anti-parallel
Strand 4
B
672 678anti-parallel
Strand 5
B
854 861parallel
Strand 6
B
886 892parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
553 561first strand
Strand 2
B
537 545anti-parallel
Strand 3
B
526 533anti-parallel
Strand 4
B
597 602parallel
Strand 5
B
650 655parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
606 610first strand
Strand 2
B
613 616anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il