Analysis of interatomic Contacts of Structural Units in PDB entry:
5HG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HG1 entry

There is 1 chain in PDB entry 5HG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 17GLU 913
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 5HG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 26Right-handed alpha
Helix 2
AA2
A
27 30Right-handed 310
Helix 3
AA3
A
32 52Right-handed alpha
Helix 4
AA4
A
55 59Right-handed 310
Helix 5
AA5
A
124 128Right-handed alpha
Helix 6
AA6
A
132 137Right-handed alpha
Helix 7
AA7
A
138 140Right-handed 310
Helix 8
AA8
A
142 146Right-handed 310
Helix 9
AA9
A
187 192Right-handed alpha
Helix 10
AB1
A
208 221Right-handed alpha
Helix 11
AB2
A
243 245Right-handed 310
Helix 12
AB3
A
260 264Right-handed 310
Helix 13
AB4
A
275 285Right-handed alpha
Helix 14
AB5
A
291 296Right-handed alpha
Helix 15
AB6
A
301 316Right-handed alpha
Helix 16
AB7
A
319 323Right-handed 310
Helix 17
AB8
A
326 330Right-handed 310
Helix 18
AB9
A
335 345Right-handed alpha
Helix 19
AC1
A
348 359Right-handed alpha
Helix 20
AC2
A
364 402Right-handed alpha
Helix 21
AC3
A
414 420Right-handed alpha
Helix 22
AC4
A
422 435Right-handed alpha
Helix 23
AC5
A
451 476Right-handed alpha
Helix 24
AC6
A
480 500Right-handed alpha
Helix 25
AC7
A
563 568Right-handed alpha
Helix 26
AC8
A
570 589Right-handed alpha
Helix 27
AC9
A
632 645Right-handed alpha
Helix 28
AD1
A
656 669Right-handed alpha
Helix 29
AD2
A
708 712Right-handed 310
Helix 30
AD3
A
718 722Right-handed 310
Helix 31
AD4
A
723 732Right-handed alpha
Helix 32
AD5
A
739 746Right-handed alpha
Helix 33
AD6
A
748 764Right-handed alpha
Helix 34
AD7
A
767 771Right-handed 310
Helix 35
AD8
A
774 778Right-handed 310
Helix 36
AD9
A
783 792Right-handed alpha
Helix 37
AE1
A
797 807Right-handed alpha
Helix 38
AE2
A
812 849Right-handed alpha
Helix 39
AE3
A
862 868Right-handed alpha
Helix 40
AE4
A
870 883Right-handed alpha
Helix 41
AE5
A
897 913Right-handed alpha
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There are 5 sheets in PDB entry 5HG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
234 241anti-parallel
Strand 4
A
226 230anti-parallel
Strand 5
A
406 413parallel
Strand 6
A
438 444parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
92 97anti-parallel
Strand 3
A
78 84anti-parallel
Strand 4
A
150 153parallel
Strand 5
A
204 207parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 513first strand
Strand 2
A
702 706anti-parallel
Strand 3
A
682 689anti-parallel
Strand 4
A
672 678anti-parallel
Strand 5
A
854 861parallel
Strand 6
A
886 892parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
553 560first strand
Strand 2
A
538 545anti-parallel
Strand 3
A
526 533anti-parallel
Strand 4
A
596 602parallel
Strand 5
A
649 655parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 610first strand
Strand 2
A
613 616anti-parallel
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