Analysis of interatomic Contacts of Structural Units in PDB entry:
5HI0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HI0 entry

There is 1 chain in PDB entry 5HI0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6LYS 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5HI0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 31Right-handed alpha
Helix 2
AA2
A
31 36Right-handed alpha
Helix 3
AA3
A
53 55Right-handed 310
Helix 4
AA4
A
167 173Right-handed alpha
Helix 5
AA5
A
175 184Right-handed alpha
Helix 6
AA6
A
187 191Right-handed 310
Helix 7
AA7
A
208 212Right-handed 310
Helix 8
AA8
A
230 232Right-handed 310
Helix 9
AA9
A
344 350Right-handed alpha
Helix 10
AB1
A
352 361Right-handed alpha
Helix 11
AB2
A
363 368Right-handed alpha
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There are 7 sheets in PDB entry 5HI0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
15 16anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
308 312anti-parallel
Strand 3
A
279 285anti-parallel
Strand 4
A
328 334anti-parallel
Strand 5
A
257 263anti-parallel
Strand 6
A
240 245anti-parallel
Strand 7
A
235 237anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
63 68anti-parallel
Strand 3
A
80 86anti-parallel
Strand 4
A
140 155anti-parallel
Strand 5
A
91 96anti-parallel
Strand 6
A
200 201anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 166first strand
Strand 2
A
91 96anti-parallel
Strand 3
A
140 155anti-parallel
Strand 4
A
101 115anti-parallel
Strand 5
A
121 126anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 126first strand
Strand 2
A
101 115anti-parallel
Strand 3
A
130 134anti-parallel
Strand 4
A
226 228anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 305first strand
Strand 2
A
287 293anti-parallel
Strand 3
A
317 322anti-parallel
Strand 4
A
267 273anti-parallel
Strand 5
A
342 343anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 305first strand
Strand 2
A
287 293anti-parallel
Strand 3
A
317 322anti-parallel
Strand 4
A
267 273anti-parallel
Strand 5
A
377 379anti-parallel
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