Analysis of interatomic Contacts of Structural Units in PDB entry:
5HI9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HI9 entry

There are 4 chains in PDB entry 5HI9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 74TRP 715
B
 ARG 74TRP 715
C
 ARG 74TRP 715
D
 ARG 74TRP 715
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are136 helices in PDB entry 5HI9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 87Right-handed alpha
Helix 2
AA2
A
94 103Right-handed alpha
Helix 3
AA3
A
119 128Right-handed alpha
Helix 4
AA4
A
135 147Right-handed alpha
Helix 5
AA5
A
151 155Right-handed 310
Helix 6
AA6
A
159 163Right-handed 310
Helix 7
AA7
A
167 172Right-handed alpha
Helix 8
AA8
A
177 187Right-handed alpha
Helix 9
AA9
A
212 220Right-handed alpha
Helix 10
AB1
A
224 232Right-handed alpha
Helix 11
AB2
A
248 257Right-handed alpha
Helix 12
AB3
A
260 282Right-handed alpha
Helix 13
AB4
A
297 305Right-handed alpha
Helix 14
AB5
A
310 316Right-handed alpha
Helix 15
AB6
A
356 361Right-handed alpha
Helix 16
AB7
A
370 375Right-handed alpha
Helix 17
AB8
A
375 407Right-handed alpha
Helix 18
AB9
A
408 414Right-handed alpha
Helix 19
AC1
A
431 459Right-handed alpha
Helix 20
AC2
A
463 465Right-handed 310
Helix 21
AC3
A
466 483Right-handed alpha
Helix 22
AC4
A
483 491Right-handed alpha
Helix 23
AC5
A
500 511Right-handed alpha
Helix 24
AC6
A
512 514Right-handed 310
Helix 25
AC7
A
522 545Right-handed alpha
Helix 26
AC8
A
548 559Right-handed alpha
Helix 27
AC9
A
560 561Right-handed 310
Helix 28
AD1
A
591 591Right-handed 310
Helix 29
AD2
A
592 597Right-handed alpha
Helix 30
AD3
A
597 602Right-handed alpha
Helix 31
AD4
A
619 627Right-handed alpha
Helix 32
AD5
A
628 650Right-handed alpha
Helix 33
AD6
A
654 668Right-handed alpha
Helix 34
AD7
A
669 671Right-handed 310
Helix 35
AD8
B
76 87Right-handed alpha
Helix 36
AD9
B
94 103Right-handed alpha
Helix 37
AE1
B
119 128Right-handed alpha
Helix 38
AE2
B
135 147Right-handed alpha
Helix 39
AE3
B
151 155Right-handed 310
Helix 40
AE4
B
159 163Right-handed 310
Helix 41
AE5
B
167 172Right-handed alpha
Helix 42
AE6
B
177 187Right-handed alpha
Helix 43
AE7
B
212 220Right-handed alpha
Helix 44
AE8
B
224 232Right-handed alpha
Helix 45
AE9
B
248 257Right-handed alpha
Helix 46
AF1
B
260 282Right-handed alpha
Helix 47
AF2
B
297 305Right-handed alpha
Helix 48
AF3
B
310 316Right-handed alpha
Helix 49
AF4
B
356 361Right-handed alpha
Helix 50
AF5
B
370 375Right-handed alpha
Helix 51
AF6
B
375 407Right-handed alpha
Helix 52
AF7
B
408 414Right-handed alpha
Helix 53
AF8
B
431 459Right-handed alpha
Helix 54
AF9
B
463 465Right-handed 310
Helix 55
AG1
B
466 483Right-handed alpha
Helix 56
AG2
B
483 491Right-handed alpha
Helix 57
AG3
B
500 511Right-handed alpha
Helix 58
AG4
B
512 514Right-handed 310
Helix 59
AG5
B
522 545Right-handed alpha
Helix 60
AG6
B
548 559Right-handed alpha
Helix 61
AG7
B
560 561Right-handed 310
Helix 62
AG8
B
591 591Right-handed 310
Helix 63
AG9
B
592 597Right-handed alpha
Helix 64
AH1
B
597 602Right-handed alpha
Helix 65
AH2
B
619 627Right-handed alpha
Helix 66
AH3
B
628 650Right-handed alpha
Helix 67
AH4
B
654 668Right-handed alpha
Helix 68
AH5
B
669 671Right-handed 310
Helix 69
AH6
C
76 87Right-handed alpha
Helix 70
AH7
C
94 103Right-handed alpha
Helix 71
AH8
C
119 128Right-handed alpha
Helix 72
AH9
C
135 147Right-handed alpha
Helix 73
AI1
C
151 155Right-handed 310
Helix 74
AI2
C
159 163Right-handed 310
Helix 75
AI3
C
167 172Right-handed alpha
Helix 76
AI4
C
177 187Right-handed alpha
Helix 77
AI5
C
212 220Right-handed alpha
Helix 78
AI6
C
224 232Right-handed alpha
Helix 79
AI7
C
248 257Right-handed alpha
Helix 80
AI8
C
260 282Right-handed alpha
Helix 81
AI9
C
297 305Right-handed alpha
Helix 82
AJ1
C
310 316Right-handed alpha
Helix 83
AJ2
C
356 361Right-handed alpha
Helix 84
AJ3
C
370 375Right-handed alpha
Helix 85
AJ4
C
375 407Right-handed alpha
Helix 86
AJ5
C
408 414Right-handed alpha
Helix 87
AJ6
C
431 459Right-handed alpha
Helix 88
AJ7
C
463 465Right-handed 310
Helix 89
AJ8
C
466 483Right-handed alpha
Helix 90
AJ9
C
483 491Right-handed alpha
Helix 91
AK1
C
500 511Right-handed alpha
Helix 92
AK2
C
512 514Right-handed 310
Helix 93
AK3
C
522 545Right-handed alpha
Helix 94
AK4
C
548 559Right-handed alpha
Helix 95
AK5
C
560 561Right-handed 310
Helix 96
AK6
C
591 591Right-handed 310
Helix 97
AK7
C
592 597Right-handed alpha
Helix 98
AK8
C
597 602Right-handed alpha
Helix 99
AK9
C
619 627Right-handed alpha
Helix 100
AL1
C
628 650Right-handed alpha
Helix 101
AL2
C
654 668Right-handed alpha
Helix 102
AL3
C
669 671Right-handed 310
Helix 103
AL4
D
76 87Right-handed alpha
Helix 104
AL5
D
94 103Right-handed alpha
Helix 105
AL6
D
119 128Right-handed alpha
Helix 106
AL7
D
135 147Right-handed alpha
Helix 107
AL8
D
151 155Right-handed 310
Helix 108
AL9
D
159 163Right-handed 310
Helix 109
AM1
D
167 172Right-handed alpha
Helix 110
AM2
D
177 187Right-handed alpha
Helix 111
AM3
D
212 220Right-handed alpha
Helix 112
AM4
D
224 232Right-handed alpha
Helix 113
AM5
D
248 257Right-handed alpha
Helix 114
AM6
D
260 282Right-handed alpha
Helix 115
AM7
D
297 305Right-handed alpha
Helix 116
AM8
D
310 316Right-handed alpha
Helix 117
AM9
D
356 361Right-handed alpha
Helix 118
AN1
D
370 375Right-handed alpha
Helix 119
AN2
D
375 407Right-handed alpha
Helix 120
AN3
D
408 414Right-handed alpha
Helix 121
AN4
D
431 459Right-handed alpha
Helix 122
AN5
D
463 465Right-handed 310
Helix 123
AN6
D
466 483Right-handed alpha
Helix 124
AN7
D
483 491Right-handed alpha
Helix 125
AN8
D
500 511Right-handed alpha
Helix 126
AN9
D
512 514Right-handed 310
Helix 127
AO1
D
522 545Right-handed alpha
Helix 128
AO2
D
548 559Right-handed alpha
Helix 129
AO3
D
560 561Right-handed 310
Helix 130
AO4
D
591 591Right-handed 310
Helix 131
AO5
D
592 597Right-handed alpha
Helix 132
AO6
D
597 602Right-handed alpha
Helix 133
AO7
D
619 627Right-handed alpha
Helix 134
AO8
D
628 650Right-handed alpha
Helix 135
AO9
D
654 668Right-handed alpha
Helix 136
AP1
D
669 671Right-handed 310
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There are 4 sheets in PDB entry 5HI9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 334first strand
Strand 2
A
340 344anti-parallel
Strand 3
A
704 708anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 334first strand
Strand 2
B
340 344anti-parallel
Strand 3
B
704 708anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
332 334first strand
Strand 2
C
340 344anti-parallel
Strand 3
C
704 708anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
332 334first strand
Strand 2
D
340 344anti-parallel
Strand 3
D
704 708anti-parallel
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