Analysis of interatomic Contacts of Structural Units in PDB entry:
5HIM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HIM entry

There is 1 chain in PDB entry 5HIM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 20ASN 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5HIM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 38Right-handed alpha
Helix 2
AA2
A
39 48Right-handed alpha
Helix 3
AA3
A
49 58Right-handed alpha
Helix 4
AA4
A
71 81Right-handed alpha
Helix 5
AA5
A
90 104Right-handed alpha
Helix 6
AA6
A
114 121Right-handed 310
Helix 7
AA7
A
135 139Right-handed 310
Helix 8
AA8
A
141 155Right-handed alpha
Helix 9
AA9
A
168 175Right-handed alpha
Helix 10
AB1
A
222 233Right-handed alpha
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There are 2 sheets in PDB entry 5HIM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
83 88parallel
Strand 3
A
62 65parallel
Strand 4
A
126 131parallel
Strand 5
A
156 167parallel
Strand 6
A
255 261anti-parallel
Strand 7
A
237 243anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 185first strand
Strand 2
A
190 198anti-parallel
Strand 3
A
201 208anti-parallel
Strand 4
A
213 218anti-parallel
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