Analysis of interatomic Contacts of Structural Units in PDB entry:
5HJ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HJ7 entry

There are 2 chains in PDB entry 5HJ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2LEU 255
B
 SER -1VAL 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5HJ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 28Right-handed alpha
Helix 2
AA2
A
48 66Right-handed alpha
Helix 3
AA3
A
75 90Right-handed alpha
Helix 4
AA4
A
98 109Right-handed alpha
Helix 5
AA5
A
119 125Right-handed alpha
Helix 6
AA6
A
126 132Right-handed alpha
Helix 7
AA7
A
133 135Right-handed 310
Helix 8
AA8
A
147 154Right-handed alpha
Helix 9
AA9
A
159 176Right-handed alpha
Helix 10
AB1
A
187 190Right-handed 310
Helix 11
AB2
A
191 200Right-handed alpha
Helix 12
AB3
A
208 223Right-handed alpha
Helix 13
AB4
A
243 255Right-handed alpha
Helix 14
AB5
B
17 28Right-handed alpha
Helix 15
AB6
B
48 66Right-handed alpha
Helix 16
AB7
B
75 90Right-handed alpha
Helix 17
AB8
B
98 109Right-handed alpha
Helix 18
AB9
B
119 125Right-handed alpha
Helix 19
AC1
B
126 132Right-handed alpha
Helix 20
AC2
B
133 135Right-handed 310
Helix 21
AC3
B
147 154Right-handed alpha
Helix 22
AC4
B
159 176Right-handed alpha
Helix 23
AC5
B
187 190Right-handed 310
Helix 24
AC6
B
191 200Right-handed alpha
Helix 25
AC7
B
208 223Right-handed alpha
Helix 26
AC8
B
243 256Right-handed alpha
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There are 4 sheets in PDB entry 5HJ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 96first strand
Strand 2
A
70 73parallel
Strand 3
A
8 12parallel
Strand 4
A
33 37parallel
Strand 5
A
236 240parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 144first strand
Strand 2
A
113 118parallel
Strand 3
A
180 183parallel
Strand 4
A
204 207parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
94 96first strand
Strand 2
B
70 73parallel
Strand 3
B
8 12parallel
Strand 4
B
33 37parallel
Strand 5
B
236 240parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 144first strand
Strand 2
B
113 118parallel
Strand 3
B
180 183parallel
Strand 4
B
204 207parallel
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