Analysis of interatomic Contacts of Structural Units in PDB entry:
5HJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HJS entry

There are 4 chains in PDB entry 5HJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 41HIS 282
B
 GLN 41HIS 282
C
 SER -3GLU 11
D
 SER -3GLU 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5HJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 57Right-handed alpha
Helix 2
AA2
A
83 109Right-handed alpha
Helix 3
AA3
A
113 117Right-handed 310
Helix 4
AA4
A
118 141Right-handed alpha
Helix 5
AA5
A
158 165Right-handed alpha
Helix 6
AA6
A
168 186Right-handed alpha
Helix 7
AA7
A
188 201Right-handed alpha
Helix 8
AA8
A
210 233Right-handed alpha
Helix 9
AA9
A
238 267Right-handed alpha
Helix 10
AB1
A
272 280Right-handed alpha
Helix 11
AB2
B
43 58Right-handed alpha
Helix 12
AB3
B
83 110Right-handed alpha
Helix 13
AB4
B
118 140Right-handed alpha
Helix 14
AB5
B
158 165Right-handed alpha
Helix 15
AB6
B
168 186Right-handed alpha
Helix 16
AB7
B
188 201Right-handed alpha
Helix 17
AB8
B
210 233Right-handed alpha
Helix 18
AB9
B
238 267Right-handed alpha
Helix 19
AC1
B
272 280Right-handed alpha
Helix 20
AC2
C
-2 1Right-handed 310
Helix 21
AC3
C
2 11Right-handed alpha
Helix 22
AC4
D
-2 2Right-handed alpha
Helix 23
AC5
D
2 11Right-handed alpha
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There are 2 sheets in PDB entry 5HJS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
148 151anti-parallel
Strand 3
A
155 157anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
148 151anti-parallel
Strand 3
B
155 157anti-parallel
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