Analysis of interatomic Contacts of Structural Units in PDB entry:
5HK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HK6 entry

There are 4 chains in PDB entry 5HK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 149ARG 284
B
 ILE 153ASP 279
C
 ILE 153GLY 286
D
 ILE 153GLY 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5HK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
152 173Right-handed alpha
Helix 2
AA2
A
176 181Right-handed alpha
Helix 3
AA3
A
185 195Right-handed alpha
Helix 4
AA4
A
203 211Right-handed alpha
Helix 5
AA5
A
213 238Right-handed alpha
Helix 6
AA6
A
255 259Right-handed 310
Helix 7
AA7
A
260 273Right-handed alpha
Helix 8
AA8
A
279 283Right-handed 310
Helix 9
AA9
B
154 173Right-handed alpha
Helix 10
AB1
B
176 181Right-handed alpha
Helix 11
AB2
B
185 195Right-handed alpha
Helix 12
AB3
B
203 211Right-handed alpha
Helix 13
AB4
B
213 238Right-handed alpha
Helix 14
AB5
B
260 276Right-handed alpha
Helix 15
AB6
C
154 173Right-handed alpha
Helix 16
AB7
C
176 181Right-handed alpha
Helix 17
AB8
C
185 195Right-handed alpha
Helix 18
AB9
C
203 211Right-handed alpha
Helix 19
AC1
C
213 238Right-handed alpha
Helix 20
AC2
C
260 273Right-handed alpha
Helix 21
AC3
D
154 173Right-handed alpha
Helix 22
AC4
D
176 181Right-handed alpha
Helix 23
AC5
D
185 195Right-handed alpha
Helix 24
AC6
D
203 211Right-handed alpha
Helix 25
AC7
D
213 238Right-handed alpha
Helix 26
AC8
D
260 276Right-handed alpha
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There are no sheets in PDB entry 5HK6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il