Analysis of interatomic Contacts of Structural Units in PDB entry:
5HL8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HL8 entry

There are 4 chains in PDB entry 5HL8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 315ASN 395
B
 HIS 315ASN 395
C
 PRO 317GLY 397
D
 PRO 317GLU 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5HL8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
317 331Right-handed alpha
Helix 2
AA2
A
357 368Right-handed alpha
Helix 3
AA3
B
317 331Right-handed alpha
Helix 4
AA4
B
357 368Right-handed alpha
Helix 5
AA5
C
318 330Right-handed alpha
Helix 6
AA6
C
357 368Right-handed alpha
Helix 7
AA7
D
318 331Right-handed alpha
Helix 8
AA8
D
357 368Right-handed alpha
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There are 3 sheets in PDB entry 5HL8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 382first strand
Strand 2
A
385 394anti-parallel
Strand 3
A
349 355anti-parallel
Strand 4
A
335 343anti-parallel
Strand 5
D
335 343anti-parallel
Strand 6
D
348 355anti-parallel
Strand 7
D
388 393anti-parallel
Strand 8
D
373 376anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 376first strand
Strand 2
B
385 394anti-parallel
Strand 3
B
380 382anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 376first strand
Strand 2
B
385 394anti-parallel
Strand 3
B
348 355anti-parallel
Strand 4
B
335 343anti-parallel
Strand 5
C
335 343anti-parallel
Strand 6
C
348 355anti-parallel
Strand 7
C
386 394anti-parallel
Strand 8
C
372 376anti-parallel
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