Analysis of interatomic Contacts of Structural Units in PDB entry:
5HLA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HLA entry

There is 1 chain in PDB entry 5HLA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 67MET 799
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5HLA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 96Right-handed alpha
Helix 2
AA2
A
120 130Right-handed alpha
Helix 3
AA3
A
222 233Right-handed alpha
Helix 4
AA4
A
268 277Right-handed alpha
Helix 5
AA5
A
288 301Right-handed alpha
Helix 6
AA6
A
302 311Right-handed alpha
Helix 7
AA7
A
326 335Right-handed alpha
Helix 8
AA8
A
338 342Right-handed 310
Helix 9
AA9
A
343 353Right-handed alpha
Helix 10
AB1
A
354 356Right-handed 310
Helix 11
AB2
A
365 381Right-handed alpha
Helix 12
AB3
A
390 395Right-handed alpha
Helix 13
AB4
A
411 427Right-handed alpha
Helix 14
AB5
A
443 466Right-handed alpha
Helix 15
AB6
A
509 511Right-handed 310
Helix 16
AB7
A
512 521Right-handed alpha
Helix 17
AB8
A
565 571Right-handed alpha
Helix 18
AB9
A
573 585Right-handed alpha
Helix 19
AC1
A
585 597Right-handed alpha
Helix 20
AC2
A
599 603Right-handed 310
Helix 21
AC3
A
606 612Right-handed 310
Helix 22
AC4
A
617 630Right-handed alpha
Helix 23
AC5
A
663 680Right-handed alpha
Helix 24
AC6
A
683 688Right-handed alpha
Helix 25
AC7
A
690 694Right-handed 310
Helix 26
AC8
A
703 705Right-handed 310
Helix 27
AC9
A
738 749Right-handed alpha
Helix 28
AD1
A
792 798Right-handed alpha
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There are 11 sheets in PDB entry 5HLA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 205first strand
Strand 2
A
104 107anti-parallel
Strand 3
A
437 440parallel
Strand 4
A
640 644anti-parallel
Strand 5
A
650 653anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
195 196anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
144 147parallel
Strand 3
A
151 156anti-parallel
Strand 4
A
169 176anti-parallel
Strand 5
A
179 185anti-parallel
Strand 6
A
190 191anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 160first strand
Strand 2
A
165 166anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
322 325parallel
Strand 3
A
315 319anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 488first strand
Strand 2
A
471 478anti-parallel
Strand 3
A
717 724anti-parallel
Strand 4
A
707 713anti-parallel
Strand 5
A
696 701anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 507first strand
Strand 2
A
615 616anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 534first strand
Strand 2
A
562 564anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
540 541first strand
Strand 2
A
547 548anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
633 634first strand
Strand 2
A
659 660anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
774 775first strand
Strand 2
A
763 768anti-parallel
Strand 3
A
781 786anti-parallel
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