Analysis of interatomic Contacts of Structural Units in PDB entry:
5HN6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HN6 entry

There is 1 chain in PDB entry 5HN6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5HN6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 28Right-handed alpha
Helix 2
AA2
A
39 47Right-handed alpha
Helix 3
AA3
A
51 59Right-handed alpha
Helix 4
AA4
A
80 89Right-handed alpha
Helix 5
AA5
A
115 119Right-handed 310
Helix 6
AA6
A
136 153Right-handed alpha
Helix 7
AA7
A
167 184Right-handed alpha
Helix 8
AA8
A
193 203Right-handed alpha
Helix 9
AA9
A
213 224Right-handed alpha
Helix 10
AB1
A
225 227Right-handed 310
Helix 11
AB2
A
230 233Right-handed 310
Helix 12
AB3
A
264 279Right-handed alpha
Helix 13
AB4
A
282 296Right-handed alpha
Helix 14
AB5
A
307 324Right-handed alpha
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There are 2 sheets in PDB entry 5HN6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
2 9parallel
Strand 3
A
63 68parallel
Strand 4
A
244 248parallel
Strand 5
A
235 239anti-parallel
Strand 6
A
93 99anti-parallel
Strand 7
A
106 112anti-parallel
Strand 8
A
209 212parallel
Strand 9
A
158 162parallel
Strand 10
A
188 192parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
129 131anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il