Analysis of interatomic Contacts of Structural Units in PDB entry:
5HN7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HN7 entry

There are 8 chains in PDB entry 5HN7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 36	GLY 395
B	PHE 36	GLY 395
C	LEU 34	GLY 395
D	ALA 35	GLY 395
E	LEU 34	VAL 396
F	ALA 35	GLY 395
G	LEU 34	GLY 395
H	ALA 35	GLY 395

There are153 helices in PDB entry 5HN7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	39	Right-handed 310
Helix 2	AA2	A	40	54	Right-handed alpha
Helix 3	AA3	A	58	78	Right-handed alpha
Helix 4	AA4	A	82	95	Right-handed alpha
Helix 5	AA5	A	101	130	Right-handed alpha
Helix 6	AA6	A	141	144	Right-handed 310
Helix 7	AA7	A	147	172	Right-handed alpha
Helix 8	AA8	A	176	201	Right-handed alpha
Helix 9	AA9	A	203	207	Right-handed 310
Helix 10	AB1	A	227	231	Right-handed 310
Helix 11	AB2	A	232	249	Right-handed alpha
Helix 12	AB3	A	249	261	Right-handed alpha
Helix 13	AB4	A	267	294	Right-handed alpha
Helix 14	AB5	A	295	300	Right-handed alpha
Helix 15	AB6	A	312	322	Right-handed alpha
Helix 16	AB7	A	323	334	Right-handed alpha
Helix 17	AB8	A	338	352	Right-handed alpha
Helix 18	AB9	A	353	375	Right-handed alpha
Helix 19	AC1	A	378	392	Right-handed alpha
Helix 20	AC2	B	40	54	Right-handed alpha
Helix 21	AC3	B	58	78	Right-handed alpha
Helix 22	AC4	B	82	95	Right-handed alpha
Helix 23	AC5	B	101	130	Right-handed alpha
Helix 24	AC6	B	141	144	Right-handed 310
Helix 25	AC7	B	147	172	Right-handed alpha
Helix 26	AC8	B	176	201	Right-handed alpha
Helix 27	AC9	B	203	207	Right-handed 310
Helix 28	AD1	B	227	231	Right-handed 310
Helix 29	AD2	B	232	249	Right-handed alpha
Helix 30	AD3	B	249	261	Right-handed alpha
Helix 31	AD4	B	267	294	Right-handed alpha
Helix 32	AD5	B	295	300	Right-handed alpha
Helix 33	AD6	B	312	322	Right-handed alpha
Helix 34	AD7	B	323	334	Right-handed alpha
Helix 35	AD8	B	338	352	Right-handed alpha
Helix 36	AD9	B	353	374	Right-handed alpha
Helix 37	AE1	B	378	392	Right-handed alpha
Helix 38	AE2	C	35	40	Right-handed alpha
Helix 39	AE3	C	40	53	Right-handed alpha
Helix 40	AE4	C	58	78	Right-handed alpha
Helix 41	AE5	C	82	95	Right-handed alpha
Helix 42	AE6	C	101	130	Right-handed alpha
Helix 43	AE7	C	141	144	Right-handed 310
Helix 44	AE8	C	147	172	Right-handed alpha
Helix 45	AE9	C	176	201	Right-handed alpha
Helix 46	AF1	C	203	208	Right-handed alpha
Helix 47	AF2	C	227	231	Right-handed 310
Helix 48	AF3	C	232	244	Right-handed alpha
Helix 49	AF4	C	244	249	Right-handed alpha
Helix 50	AF5	C	249	261	Right-handed alpha
Helix 51	AF6	C	267	294	Right-handed alpha
Helix 52	AF7	C	295	300	Right-handed alpha
Helix 53	AF8	C	312	322	Right-handed alpha
Helix 54	AF9	C	323	334	Right-handed alpha
Helix 55	AG1	C	338	352	Right-handed alpha
Helix 56	AG2	C	353	374	Right-handed alpha
Helix 57	AG3	C	378	392	Right-handed alpha
Helix 58	AG4	D	36	40	Right-handed alpha
Helix 59	AG5	D	40	54	Right-handed alpha
Helix 60	AG6	D	58	78	Right-handed alpha
Helix 61	AG7	D	82	95	Right-handed alpha
Helix 62	AG8	D	102	130	Right-handed alpha
Helix 63	AG9	D	141	144	Right-handed 310
Helix 64	AH1	D	147	172	Right-handed alpha
Helix 65	AH2	D	176	201	Right-handed alpha
Helix 66	AH3	D	203	207	Right-handed 310
Helix 67	AH4	D	227	231	Right-handed 310
Helix 68	AH5	D	232	249	Right-handed alpha
Helix 69	AH6	D	249	260	Right-handed alpha
Helix 70	AH7	D	267	294	Right-handed alpha
Helix 71	AH8	D	295	300	Right-handed alpha
Helix 72	AH9	D	312	322	Right-handed alpha
Helix 73	AI1	D	323	334	Right-handed alpha
Helix 74	AI2	D	338	352	Right-handed alpha
Helix 75	AI3	D	353	374	Right-handed alpha
Helix 76	AI4	D	378	392	Right-handed alpha
Helix 77	AI5	E	35	40	Right-handed alpha
Helix 78	AI6	E	40	54	Right-handed alpha
Helix 79	AI7	E	58	78	Right-handed alpha
Helix 80	AI8	E	82	95	Right-handed alpha
Helix 81	AI9	E	101	130	Right-handed alpha
Helix 82	AJ1	E	141	144	Right-handed 310
Helix 83	AJ2	E	147	172	Right-handed alpha
Helix 84	AJ3	E	176	201	Right-handed alpha
Helix 85	AJ4	E	203	208	Right-handed alpha
Helix 86	AJ5	E	227	231	Right-handed 310
Helix 87	AJ6	E	232	244	Right-handed alpha
Helix 88	AJ7	E	244	249	Right-handed alpha
Helix 89	AJ8	E	249	261	Right-handed alpha
Helix 90	AJ9	E	267	294	Right-handed alpha
Helix 91	AK1	E	295	300	Right-handed alpha
Helix 92	AK2	E	312	322	Right-handed alpha
Helix 93	AK3	E	323	334	Right-handed alpha
Helix 94	AK4	E	338	352	Right-handed alpha
Helix 95	AK5	E	353	374	Right-handed alpha
Helix 96	AK6	E	378	392	Right-handed alpha
Helix 97	AK7	F	36	53	Right-handed alpha
Helix 98	AK8	F	58	78	Right-handed alpha
Helix 99	AK9	F	82	96	Right-handed alpha
Helix 100	AL1	F	102	130	Right-handed alpha
Helix 101	AL2	F	141	144	Right-handed 310
Helix 102	AL3	F	147	172	Right-handed alpha
Helix 103	AL4	F	176	201	Right-handed alpha
Helix 104	AL5	F	203	207	Right-handed 310
Helix 105	AL6	F	227	231	Right-handed 310
Helix 106	AL7	F	232	249	Right-handed alpha
Helix 107	AL8	F	249	261	Right-handed alpha
Helix 108	AL9	F	267	294	Right-handed alpha
Helix 109	AM1	F	295	300	Right-handed alpha
Helix 110	AM2	F	312	322	Right-handed alpha
Helix 111	AM3	F	323	334	Right-handed alpha
Helix 112	AM4	F	338	352	Right-handed alpha
Helix 113	AM5	F	353	374	Right-handed alpha
Helix 114	AM6	F	378	392	Right-handed alpha
Helix 115	AM7	G	35	54	Right-handed alpha
Helix 116	AM8	G	58	78	Right-handed alpha
Helix 117	AM9	G	82	95	Right-handed alpha
Helix 118	AN1	G	102	130	Right-handed alpha
Helix 119	AN2	G	141	144	Right-handed 310
Helix 120	AN3	G	147	172	Right-handed alpha
Helix 121	AN4	G	176	201	Right-handed alpha
Helix 122	AN5	G	203	207	Right-handed 310
Helix 123	AN6	G	227	231	Right-handed 310
Helix 124	AN7	G	232	244	Right-handed alpha
Helix 125	AN8	G	244	249	Right-handed alpha
Helix 126	AN9	G	249	261	Right-handed alpha
Helix 127	AO1	G	267	294	Right-handed alpha
Helix 128	AO2	G	295	300	Right-handed alpha
Helix 129	AO3	G	312	322	Right-handed alpha
Helix 130	AO4	G	323	334	Right-handed alpha
Helix 131	AO5	G	338	352	Right-handed alpha
Helix 132	AO6	G	353	374	Right-handed alpha
Helix 133	AO7	G	378	392	Right-handed alpha
Helix 134	AO8	H	36	40	Right-handed alpha
Helix 135	AO9	H	40	54	Right-handed alpha
Helix 136	AP1	H	58	78	Right-handed alpha
Helix 137	AP2	H	82	95	Right-handed alpha
Helix 138	AP3	H	101	130	Right-handed alpha
Helix 139	AP4	H	141	144	Right-handed 310
Helix 140	AP5	H	147	172	Right-handed alpha
Helix 141	AP6	H	176	201	Right-handed alpha
Helix 142	AP7	H	203	207	Right-handed 310
Helix 143	AP8	H	227	231	Right-handed 310
Helix 144	AP9	H	232	244	Right-handed alpha
Helix 145	AQ1	H	244	249	Right-handed alpha
Helix 146	AQ2	H	249	260	Right-handed alpha
Helix 147	AQ3	H	267	294	Right-handed alpha
Helix 148	AQ4	H	295	300	Right-handed alpha
Helix 149	AQ5	H	312	322	Right-handed alpha
Helix 150	AQ6	H	323	334	Right-handed alpha
Helix 151	AQ7	H	338	352	Right-handed alpha
Helix 152	AQ8	H	353	374	Right-handed alpha
Helix 153	AQ9	H	378	392	Right-handed alpha

There are 8 sheets in PDB entry 5HN7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	138	139	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	135	first strand
Strand 2	B	138	139	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	135	first strand
Strand 2	C	138	139	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	134	135	first strand
Strand 2	D	138	139	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	135	first strand
Strand 2	E	138	139	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	134	135	first strand
Strand 2	F	138	139	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	134	135	first strand
Strand 2	G	138	139	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	134	135	first strand
Strand 2	H	138	139	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HN7

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HN7