Analysis of interatomic Contacts of Structural Units in PDB entry:
5HOB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HOB entry

There are 8 chains in PDB entry 5HOB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 351LEU 395
B
 ASP 353GLN 397
C
 GLU 352GLN 397
D
 GLU 352LEU 395
E
 GLY 349LEU 396
F
 ASP 353LEU 396
G
 ASP 351GLN 397
H
 GLY 349GLN 394
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5HOB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
361 378Right-handed alpha
Helix 2
AA2
A
379 381Right-handed 310
Helix 3
AA3
A
382 395Right-handed alpha
Helix 4
AA4
B
361 379Right-handed alpha
Helix 5
AA5
B
382 394Right-handed alpha
Helix 6
AA6
C
361 379Right-handed alpha
Helix 7
AA7
C
382 394Right-handed alpha
Helix 8
AA8
D
361 378Right-handed alpha
Helix 9
AA9
D
379 381Right-handed 310
Helix 10
AB1
D
382 395Right-handed alpha
Helix 11
AB2
E
361 378Right-handed alpha
Helix 12
AB3
E
379 381Right-handed 310
Helix 13
AB4
E
382 395Right-handed alpha
Helix 14
AB5
F
361 379Right-handed alpha
Helix 15
AB6
F
382 396Right-handed alpha
Helix 16
AB7
G
361 379Right-handed alpha
Helix 17
AB8
G
382 396Right-handed alpha
Helix 18
AB9
H
361 378Right-handed alpha
Helix 19
AC1
H
379 381Right-handed 310
Helix 20
AC2
H
382 394Right-handed alpha
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There are 4 sheets in PDB entry 5HOB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 360first strand
Strand 2
B
354 360anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
354 360first strand
Strand 2
D
354 360anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
354 360first strand
Strand 2
F
354 360anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
354 360first strand
Strand 2
H
354 360anti-parallel
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