Analysis of interatomic Contacts of Structural Units in PDB entry:
5HOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HOL entry

There is 1 chain in PDB entry 5HOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0VAL 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5HOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 6Right-handed 310
Helix 2
AA2
A
21 28Right-handed alpha
Helix 3
AA3
A
47 56Right-handed alpha
Helix 4
AA4
A
58 72Right-handed alpha
Helix 5
AA5
A
98 102Right-handed 310
Helix 6
AA6
A
104 106Right-handed 310
Helix 7
AA7
A
107 116Right-handed alpha
Helix 8
AA8
A
134 146Right-handed alpha
Helix 9
AA9
A
156 165Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5HOL.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
15 19anti-parallel
Strand 3
A
149 154parallel
Strand 4
A
120 123parallel
Strand 5
A
33 38parallel
Strand 6
A
90 95parallel
Strand 7
A
79 83anti-parallel
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