Analysis of interatomic Contacts of Structural Units in PDB entry:
5HPO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HPO entry

There is 1 chain in PDB entry 5HPO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LYS 1060
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5HPO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
274 279Right-handed alpha
Helix 2
AA2
A
339 352Right-handed alpha
Helix 3
AA3
A
358 362Right-handed 310
Helix 4
AA4
A
373 387Right-handed alpha
Helix 5
AA5
A
423 427Right-handed 310
Helix 6
AA6
A
435 446Right-handed alpha
Helix 7
AA7
A
465 478Right-handed alpha
Helix 8
AA8
A
508 518Right-handed alpha
Helix 9
AA9
A
519 525Right-handed alpha
Helix 10
AB1
A
551 575Right-handed alpha
Helix 11
AB2
A
588 592Right-handed 310
Helix 12
AB3
A
603 620Right-handed alpha
Helix 13
AB4
A
638 651Right-handed alpha
Helix 14
AB5
A
671 680Right-handed alpha
Helix 15
AB6
A
683 698Right-handed alpha
Helix 16
AB7
A
698 713Right-handed alpha
Helix 17
AB8
A
719 723Right-handed 310
Helix 18
AB9
A
727 731Right-handed 310
Helix 19
AC1
A
855 857Right-handed 310
Helix 20
AC2
A
895 902Right-handed alpha
Helix 21
AC3
A
941 943Right-handed 310
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There are 15 sheets in PDB entry 5HPO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
22 23anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
73 81anti-parallel
Strand 4
A
65 70anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
46 54anti-parallel
Strand 3
A
62 63anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
46 54anti-parallel
Strand 3
A
88 97anti-parallel
Strand 4
A
102 111anti-parallel
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There are 15 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 179first strand
Strand 2
A
183 187anti-parallel
Strand 3
A
191 196anti-parallel
Strand 4
A
201 206anti-parallel
Strand 5
A
211 215anti-parallel
Strand 6
A
232 240anti-parallel
Strand 7
A
223 226anti-parallel
Strand 8
A
114 126anti-parallel
Strand 9
A
131 137anti-parallel
Strand 10
A
145 152anti-parallel
Strand 11
A
155 161anti-parallel
Strand 12
A
330 335anti-parallel
Strand 13
A
294 298anti-parallel
Strand 14
A
284 290anti-parallel
Strand 15
A
247 251anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 179first strand
Strand 2
A
183 187anti-parallel
Strand 3
A
191 196anti-parallel
Strand 4
A
201 206anti-parallel
Strand 5
A
211 215anti-parallel
Strand 6
A
232 240anti-parallel
Strand 7
A
315 324anti-parallel
Strand 8
A
304 308anti-parallel
Strand 9
A
263 266anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
625 626first strand
Strand 2
A
594 596parallel
Strand 3
A
581 582parallel
Strand 4
A
531 533parallel
Strand 5
A
449 454parallel
Strand 6
A
393 396parallel
Strand 7
A
364 366parallel
Strand 8
A
655 656parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 458first strand
Strand 2
A
502 503anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 718first strand
Strand 2
A
737 739anti-parallel
Strand 3
A
743 745anti-parallel
Strand 4
A
791 794anti-parallel
Strand 5
A
764 767anti-parallel
Strand 6
A
773 775anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
755 760first strand
Strand 2
A
778 783anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
798 803first strand
Strand 2
A
822 827anti-parallel
Strand 3
A
871 876parallel
Strand 4
A
914 919anti-parallel
Strand 5
A
905 909anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
832 839first strand
Strand 2
A
845 854anti-parallel
Strand 3
A
859 864anti-parallel
Strand 4
A
926 931anti-parallel
Strand 5
A
882 885anti-parallel
Strand 6
A
888 889anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
938 939first strand
Strand 2
A
1051 1059anti-parallel
Strand 3
A
962 966anti-parallel
Strand 4
A
949 951anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
938 939first strand
Strand 2
A
1051 1059anti-parallel
Strand 3
A
984 993anti-parallel
Strand 4
A
1024 1032anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
944 946first strand
Strand 2
A
972 977anti-parallel
Strand 3
A
1037 1042anti-parallel
Strand 4
A
999 1005anti-parallel
Strand 5
A
1008 1014anti-parallel
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