Analysis of interatomic Contacts of Structural Units in PDB entry:
5HPW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HPW entry

There are 4 chains in PDB entry 5HPW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	ASN 595
B	SER 1	ASN 595
C	SER 1	ASN 595
D	SER 1	ASN 595

There are105 helices in PDB entry 5HPW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	74	83	Right-handed alpha
Helix 2	AA2	A	98	112	Right-handed alpha
Helix 3	AA3	A	124	131	Right-handed alpha
Helix 4	AA4	A	148	154	Right-handed alpha
Helix 5	AA5	A	196	204	Right-handed alpha
Helix 6	AA6	A	235	241	Right-handed alpha
Helix 7	AA7	A	259	284	Right-handed alpha
Helix 8	AA8	A	288	311	Right-handed alpha
Helix 9	AA9	A	312	317	Right-handed alpha
Helix 10	AB1	A	320	325	Right-handed alpha
Helix 11	AB2	A	342	347	Right-handed alpha
Helix 12	AB3	A	349	354	Right-handed 310
Helix 13	AB4	A	377	379	Right-handed 310
Helix 14	AB5	A	383	389	Right-handed alpha
Helix 15	AB6	A	391	402	Right-handed alpha
Helix 16	AB7	A	414	419	Right-handed alpha
Helix 17	AB8	A	432	445	Right-handed alpha
Helix 18	AB9	A	448	456	Right-handed alpha
Helix 19	AC1	A	463	472	Right-handed alpha
Helix 20	AC2	A	473	484	Right-handed alpha
Helix 21	AC3	A	491	498	Right-handed alpha
Helix 22	AC4	A	508	525	Right-handed alpha
Helix 23	AC5	A	537	545	Right-handed alpha
Helix 24	AC6	A	548	557	Right-handed alpha
Helix 25	AC7	A	580	582	Right-handed 310
Helix 26	AC8	A	587	591	Right-handed 310
Helix 27	AC9	B	74	83	Right-handed alpha
Helix 28	AD1	B	98	112	Right-handed alpha
Helix 29	AD2	B	123	131	Right-handed alpha
Helix 30	AD3	B	189	193	Right-handed 310
Helix 31	AD4	B	196	203	Right-handed alpha
Helix 32	AD5	B	235	240	Right-handed alpha
Helix 33	AD6	B	253	258	Right-handed 310
Helix 34	AD7	B	259	282	Right-handed alpha
Helix 35	AD8	B	288	311	Right-handed alpha
Helix 36	AD9	B	311	318	Right-handed alpha
Helix 37	AE1	B	320	325	Right-handed alpha
Helix 38	AE2	B	342	347	Right-handed alpha
Helix 39	AE3	B	348	354	Right-handed 310
Helix 40	AE4	B	377	379	Right-handed 310
Helix 41	AE5	B	383	388	Right-handed alpha
Helix 42	AE6	B	391	402	Right-handed alpha
Helix 43	AE7	B	414	419	Right-handed alpha
Helix 44	AE8	B	432	444	Right-handed alpha
Helix 45	AE9	B	448	456	Right-handed alpha
Helix 46	AF1	B	463	472	Right-handed alpha
Helix 47	AF2	B	473	484	Right-handed alpha
Helix 48	AF3	B	491	499	Right-handed alpha
Helix 49	AF4	B	508	525	Right-handed alpha
Helix 50	AF5	B	537	545	Right-handed alpha
Helix 51	AF6	B	548	555	Right-handed alpha
Helix 52	AF7	B	587	591	Right-handed 310
Helix 53	AF8	C	74	83	Right-handed alpha
Helix 54	AF9	C	98	112	Right-handed alpha
Helix 55	AG1	C	124	131	Right-handed alpha
Helix 56	AG2	C	148	155	Right-handed alpha
Helix 57	AG3	C	189	194	Right-handed alpha
Helix 58	AG4	C	196	204	Right-handed alpha
Helix 59	AG5	C	261	284	Right-handed alpha
Helix 60	AG6	C	288	311	Right-handed alpha
Helix 61	AG7	C	311	318	Right-handed alpha
Helix 62	AG8	C	319	322	Right-handed 310
Helix 63	AG9	C	342	347	Right-handed alpha
Helix 64	AH1	C	350	354	Right-handed 310
Helix 65	AH2	C	377	380	Right-handed 310
Helix 66	AH3	C	383	388	Right-handed alpha
Helix 67	AH4	C	391	402	Right-handed alpha
Helix 68	AH5	C	414	419	Right-handed alpha
Helix 69	AH6	C	432	444	Right-handed alpha
Helix 70	AH7	C	448	456	Right-handed alpha
Helix 71	AH8	C	463	472	Right-handed alpha
Helix 72	AH9	C	473	485	Right-handed alpha
Helix 73	AI1	C	491	499	Right-handed alpha
Helix 74	AI2	C	508	525	Right-handed alpha
Helix 75	AI3	C	537	545	Right-handed alpha
Helix 76	AI4	C	548	557	Right-handed alpha
Helix 77	AI5	D	74	83	Right-handed alpha
Helix 78	AI6	D	98	112	Right-handed alpha
Helix 79	AI7	D	126	131	Right-handed alpha
Helix 80	AI8	D	149	154	Right-handed alpha
Helix 81	AI9	D	189	194	Right-handed alpha
Helix 82	AJ1	D	196	201	Right-handed alpha
Helix 83	AJ2	D	202	204	Right-handed 310
Helix 84	AJ3	D	235	240	Right-handed alpha
Helix 85	AJ4	D	253	258	Right-handed 310
Helix 86	AJ5	D	259	278	Right-handed alpha
Helix 87	AJ6	D	278	283	Right-handed alpha
Helix 88	AJ7	D	288	311	Right-handed alpha
Helix 89	AJ8	D	311	318	Right-handed alpha
Helix 90	AJ9	D	320	325	Right-handed alpha
Helix 91	AK1	D	342	347	Right-handed alpha
Helix 92	AK2	D	348	354	Right-handed 310
Helix 93	AK3	D	377	380	Right-handed 310
Helix 94	AK4	D	383	388	Right-handed alpha
Helix 95	AK5	D	391	402	Right-handed alpha
Helix 96	AK6	D	414	419	Right-handed alpha
Helix 97	AK7	D	432	444	Right-handed alpha
Helix 98	AK8	D	448	457	Right-handed alpha
Helix 99	AK9	D	463	472	Right-handed alpha
Helix 100	AL1	D	473	485	Right-handed alpha
Helix 101	AL2	D	491	499	Right-handed alpha
Helix 102	AL3	D	508	525	Right-handed alpha
Helix 103	AL4	D	537	545	Right-handed alpha
Helix 104	AL5	D	548	557	Right-handed alpha
Helix 105	AL6	D	580	582	Right-handed 310

There are 21 sheets in PDB entry 5HPW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	A	180	181	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	97	first strand
Strand 2	A	403	405	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	143	first strand
Strand 2	A	157	158	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	359	first strand
Strand 2	A	373	375	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	561	563	first strand
Strand 2	A	576	578	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	42	first strand
Strand 2	B	180	181	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	97	first strand
Strand 2	B	403	405	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	143	first strand
Strand 2	B	157	158	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	205	first strand
Strand 2	B	212	213	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	358	first strand
Strand 2	B	374	375	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	561	562	first strand
Strand 2	B	577	578	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	42	first strand
Strand 2	C	180	181	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	97	first strand
Strand 2	C	403	405	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	143	first strand
Strand 2	C	157	158	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	359	first strand
Strand 2	C	373	375	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	561	562	first strand
Strand 2	C	577	578	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	42	first strand
Strand 2	D	180	181	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	97	first strand
Strand 2	D	403	405	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	143	first strand
Strand 2	D	157	158	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	357	359	first strand
Strand 2	D	373	375	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	561	562	first strand
Strand 2	D	577	578	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HPW

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HPW