Analysis of interatomic Contacts of Structural Units in PDB entry:
5HS3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HS3 entry

There are 6 chains in PDB entry 5HS3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 25	VAL 313
B	MET 25	VAL 313
C	MET 25	PRO 305
D	MET 25	THR 306
E	MET 25	THR 306
F	MET 25	PRO 305

There are 68 helices in PDB entry 5HS3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	44	Right-handed alpha
Helix 2	AA2	A	80	93	Right-handed alpha
Helix 3	AA3	A	97	103	Right-handed alpha
Helix 4	AA4	A	114	120	Right-handed alpha
Helix 5	AA5	A	134	142	Right-handed alpha
Helix 6	AA6	A	159	171	Right-handed alpha
Helix 7	AA7	A	186	190	Right-handed 310
Helix 8	AA8	A	221	241	Right-handed alpha
Helix 9	AA9	A	261	271	Right-handed alpha
Helix 10	AB1	A	287	291	Right-handed 310
Helix 11	AB2	A	292	294	Right-handed 310
Helix 12	AB3	B	29	44	Right-handed alpha
Helix 13	AB4	B	80	94	Right-handed alpha
Helix 14	AB5	B	97	103	Right-handed alpha
Helix 15	AB6	B	110	113	Right-handed 310
Helix 16	AB7	B	114	121	Right-handed alpha
Helix 17	AB8	B	134	139	Right-handed alpha
Helix 18	AB9	B	159	171	Right-handed alpha
Helix 19	AC1	B	186	190	Right-handed 310
Helix 20	AC2	B	221	241	Right-handed alpha
Helix 21	AC3	B	261	269	Right-handed alpha
Helix 22	AC4	B	287	291	Right-handed 310
Helix 23	AC5	B	292	294	Right-handed 310
Helix 24	AC6	C	29	43	Right-handed alpha
Helix 25	AC7	C	80	93	Right-handed alpha
Helix 26	AC8	C	97	103	Right-handed alpha
Helix 27	AC9	C	114	121	Right-handed alpha
Helix 28	AD1	C	134	141	Right-handed alpha
Helix 29	AD2	C	159	171	Right-handed alpha
Helix 30	AD3	C	186	190	Right-handed 310
Helix 31	AD4	C	222	242	Right-handed alpha
Helix 32	AD5	C	261	269	Right-handed alpha
Helix 33	AD6	C	292	294	Right-handed 310
Helix 34	AD7	D	29	44	Right-handed alpha
Helix 35	AD8	D	80	94	Right-handed alpha
Helix 36	AD9	D	97	103	Right-handed alpha
Helix 37	AE1	D	109	113	Right-handed 310
Helix 38	AE2	D	114	119	Right-handed alpha
Helix 39	AE3	D	120	122	Right-handed 310
Helix 40	AE4	D	134	142	Right-handed alpha
Helix 41	AE5	D	159	169	Right-handed alpha
Helix 42	AE6	D	186	190	Right-handed 310
Helix 43	AE7	D	221	242	Right-handed alpha
Helix 44	AE8	D	261	269	Right-handed alpha
Helix 45	AE9	D	287	291	Right-handed 310
Helix 46	AF1	D	292	294	Right-handed 310
Helix 47	AF2	E	29	44	Right-handed alpha
Helix 48	AF3	E	80	94	Right-handed alpha
Helix 49	AF4	E	97	104	Right-handed alpha
Helix 50	AF5	E	110	113	Right-handed 310
Helix 51	AF6	E	114	120	Right-handed alpha
Helix 52	AF7	E	134	142	Right-handed alpha
Helix 53	AF8	E	159	171	Right-handed alpha
Helix 54	AF9	E	186	190	Right-handed 310
Helix 55	AG1	E	222	242	Right-handed alpha
Helix 56	AG2	E	261	270	Right-handed alpha
Helix 57	AG3	E	292	294	Right-handed 310
Helix 58	AG4	F	28	44	Right-handed alpha
Helix 59	AG5	F	80	93	Right-handed alpha
Helix 60	AG6	F	97	103	Right-handed alpha
Helix 61	AG7	F	109	113	Right-handed 310
Helix 62	AG8	F	114	119	Right-handed alpha
Helix 63	AG9	F	120	122	Right-handed 310
Helix 64	AH1	F	134	142	Right-handed alpha
Helix 65	AH2	F	159	171	Right-handed alpha
Helix 66	AH3	F	183	190	Right-handed 310
Helix 67	AH4	F	221	242	Right-handed alpha
Helix 68	AH5	F	261	269	Right-handed alpha

There are 12 sheets in PDB entry 5HS3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	55	66	anti-parallel
Strand 3	A	244	258	anti-parallel
Strand 4	A	207	218	parallel
Strand 5	A	198	204	anti-parallel
Strand 6	A	178	180	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	278	281	first strand
Strand 2	A	296	299	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	55	66	anti-parallel
Strand 3	B	244	258	anti-parallel
Strand 4	B	207	218	parallel
Strand 5	B	196	204	anti-parallel
Strand 6	B	178	180	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	281	first strand
Strand 2	B	296	299	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	55	66	anti-parallel
Strand 3	C	244	258	anti-parallel
Strand 4	C	207	218	parallel
Strand 5	C	196	204	anti-parallel
Strand 6	C	178	180	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	278	281	first strand
Strand 2	C	296	299	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	47	first strand
Strand 2	D	55	66	anti-parallel
Strand 3	D	244	258	anti-parallel
Strand 4	D	207	218	parallel
Strand 5	D	196	204	anti-parallel
Strand 6	D	178	180	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	278	281	first strand
Strand 2	D	296	299	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	47	first strand
Strand 2	E	55	66	anti-parallel
Strand 3	E	244	258	anti-parallel
Strand 4	E	207	218	parallel
Strand 5	E	196	204	anti-parallel
Strand 6	E	178	180	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	278	281	first strand
Strand 2	E	296	299	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	47	first strand
Strand 2	F	55	66	anti-parallel
Strand 3	F	244	258	anti-parallel
Strand 4	F	207	218	parallel
Strand 5	F	196	204	anti-parallel
Strand 6	F	178	180	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	278	281	first strand
Strand 2	F	296	299	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HS3

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HS3