Analysis of interatomic Contacts of Structural Units in PDB entry:
5HSG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HSG entry

There is 1 chain in PDB entry 5HSG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 32PHE 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 5HSG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 61Right-handed alpha
Helix 2
AA2
A
73 87Right-handed alpha
Helix 3
AA3
A
102 112Right-handed alpha
Helix 4
AA4
A
135 155Right-handed alpha
Helix 5
AA5
A
169 184Right-handed alpha
Helix 6
AA6
A
200 215Right-handed alpha
Helix 7
AA7
A
225 239Right-handed alpha
Helix 8
AA8
A
253 262Right-handed alpha
Helix 9
AA9
A
272 289Right-handed alpha
Helix 10
AB1
A
308 316Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 5HSG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 69first strand
Strand 2
A
35 39parallel
Strand 3
A
91 94parallel
Strand 4
A
116 119parallel
Strand 5
A
130 133parallel
Strand 6
A
296 298parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 196first strand
Strand 2
A
159 165parallel
Strand 3
A
220 223parallel
Strand 4
A
246 250parallel
Strand 5
A
265 270parallel
Strand 6
A
302 304anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il