Analysis of interatomic Contacts of Structural Units in PDB entry:
5HU6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HU6 entry

There are 4 chains in PDB entry 5HU6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2ARG 142
B
 HIS 3ALA 143
C
 VAL 148ASN 406
D
 GLY 38MET 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5HU6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 19Right-handed alpha
Helix 2
AA2
A
21 37Right-handed alpha
Helix 3
AA3
A
38 44Right-handed 310
Helix 4
AA4
A
53 73Right-handed alpha
Helix 5
AA5
A
76 81Right-handed alpha
Helix 6
AA6
A
81 90Right-handed alpha
Helix 7
AA7
A
96 114Right-handed alpha
Helix 8
AA8
A
119 139Right-handed alpha
Helix 9
AA9
B
5 17Right-handed alpha
Helix 10
AB1
B
23 36Right-handed alpha
Helix 11
AB2
B
37 47Right-handed 310
Helix 12
AB3
B
51 58Right-handed alpha
Helix 13
AB4
B
58 77Right-handed alpha
Helix 14
AB5
B
81 86Right-handed alpha
Helix 15
AB6
B
86 96Right-handed alpha
Helix 16
AB7
B
101 120Right-handed alpha
Helix 17
AB8
B
121 123Right-handed 310
Helix 18
AB9
B
124 143Right-handed alpha
Helix 19
AC1
C
200 206Right-handed alpha
Helix 20
AC2
C
213 218Right-handed alpha
Helix 21
AC3
C
219 221Right-handed 310
Helix 22
AC4
C
305 315Right-handed alpha
Helix 23
AC5
C
318 322Right-handed 310
Helix 24
AC6
C
395 406Right-handed alpha
Helix 25
AC7
D
41 67Right-handed alpha
Helix 26
AC8
D
69 90Right-handed alpha
Helix 27
AC9
D
90 110Right-handed alpha
Helix 28
AD1
D
115 181Right-handed alpha
Helix 29
AD2
D
187 197Right-handed alpha
Helix 30
AD3
D
206 218Right-handed alpha
Helix 31
AD4
D
220 225Right-handed alpha
Helix 32
AD5
D
226 297Right-handed alpha
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There are 2 sheets in PDB entry 5HU6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 231first strand
Strand 2
C
222 225anti-parallel
Strand 3
C
176 180anti-parallel
Strand 4
C
186 193anti-parallel
Strand 5
C
196 199anti-parallel
Strand 6
C
248 252anti-parallel
Strand 7
C
233 238anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
297 302first strand
Strand 2
C
278 283anti-parallel
Strand 3
C
358 363anti-parallel
Strand 4
C
368 377anti-parallel
Strand 5
C
387 391anti-parallel
Strand 6
C
338 341anti-parallel
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