Analysis of interatomic Contacts of Structural Units in PDB entry:
5HU7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HU7 entry

There are 2 chains in PDB entry 5HU7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2848GLU 3137
B
 ASP 2848LYS 3138
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5HU7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2889 2904Right-handed alpha
Helix 2
AA2
A
2982 2989Right-handed alpha
Helix 3
AA3
A
2996 3006Right-handed alpha
Helix 4
AA4
A
3037 3042Right-handed alpha
Helix 5
AA5
A
3049 3066Right-handed alpha
Helix 6
AA6
B
2889 2905Right-handed alpha
Helix 7
AA7
B
2982 2989Right-handed alpha
Helix 8
AA8
B
2996 3003Right-handed alpha
Helix 9
AA9
B
3049 3053Right-handed 310
Helix 10
AB1
B
3056 3062Right-handed alpha
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There are 4 sheets in PDB entry 5HU7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2856 2857first strand
Strand 2
A
2864 2870anti-parallel
Strand 3
A
2933 2943anti-parallel
Strand 4
A
2946 2953anti-parallel
Strand 5
A
2963 2973anti-parallel
Strand 6
A
2914 2922anti-parallel
Strand 7
A
3076 3087anti-parallel
Strand 8
A
3125 3136anti-parallel
Strand 9
A
3114 3119anti-parallel
Strand 10
A
3096 3101anti-parallel
Strand 11
A
3026 3031anti-parallel
Strand 12
A
3017 3023anti-parallel
Strand 13
A
2992 2995anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2886 2887first strand
Strand 2
A
2927 2928anti-parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2856 2857first strand
Strand 2
B
2864 2870anti-parallel
Strand 3
B
2933 2941anti-parallel
Strand 4
B
2947 2953anti-parallel
Strand 5
B
2963 2973anti-parallel
Strand 6
B
2914 2922anti-parallel
Strand 7
B
3076 3087anti-parallel
Strand 8
B
3125 3136anti-parallel
Strand 9
B
3114 3119anti-parallel
Strand 10
B
3096 3101anti-parallel
Strand 11
B
3026 3031anti-parallel
Strand 12
B
3017 3023anti-parallel
Strand 13
B
2992 2995anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2886 2887first strand
Strand 2
B
2927 2928anti-parallel
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