Analysis of interatomic Contacts of Structural Units in PDB entry:
5HUC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HUC entry

There is 1 chain in PDB entry 5HUC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 24ASN 472
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5HUC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 41Right-handed alpha
Helix 2
AA2
A
51 63Right-handed alpha
Helix 3
AA3
A
70 86Right-handed alpha
Helix 4
AA4
A
105 128Right-handed alpha
Helix 5
AA5
A
150 154Right-handed 310
Helix 6
AA6
A
176 199Right-handed alpha
Helix 7
AA7
A
203 218Right-handed alpha
Helix 8
AA8
A
224 241Right-handed alpha
Helix 9
AA9
A
261 268Right-handed alpha
Helix 10
AB1
A
300 309Right-handed alpha
Helix 11
AB2
A
322 334Right-handed alpha
Helix 12
AB3
A
351 367Right-handed alpha
Helix 13
AB4
A
393 412Right-handed alpha
Helix 14
AB5
A
438 445Right-handed 310
Helix 15
AB6
A
455 472Right-handed alpha
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There are 3 sheets in PDB entry 5HUC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 95first strand
Strand 2
A
131 136parallel
Strand 3
A
253 258parallel
Strand 4
A
288 291parallel
Strand 5
A
313 317parallel
Strand 6
A
342 346parallel
Strand 7
A
372 375parallel
Strand 8
A
415 421parallel
Strand 9
A
90 95parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
279 283anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 384first strand
Strand 2
A
390 391anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il