Analysis of interatomic Contacts of Structural Units in PDB entry:
5HUM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HUM entry

There are 4 chains in PDB entry 5HUM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 3	LYS 391
B	GLY 3	LYS 391
C	GLY 3	LYS 391
D	GLY 3	LYS 391

There are 12 helices in PDB entry 5HUM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	31	Right-handed alpha
Helix 2	AA2	A	63	67	Right-handed 310
Helix 3	AA3	A	386	391	Right-handed 310
Helix 4	AA4	B	25	31	Right-handed alpha
Helix 5	AA5	B	63	67	Right-handed 310
Helix 6	AA6	B	386	391	Right-handed 310
Helix 7	AA7	C	25	31	Right-handed alpha
Helix 8	AA8	C	63	67	Right-handed 310
Helix 9	AA9	C	386	391	Right-handed 310
Helix 10	AB1	D	25	31	Right-handed alpha
Helix 11	AB2	D	63	67	Right-handed 310
Helix 12	AB3	D	386	391	Right-handed 310

There are 24 sheets in PDB entry 5HUM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	23	first strand
Strand 2	A	362	372	anti-parallel
Strand 3	A	344	352	anti-parallel
Strand 4	A	328	331	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	46	first strand
Strand 2	A	49	60	anti-parallel
Strand 3	A	78	83	anti-parallel
Strand 4	A	94	98	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	106	first strand
Strand 2	A	111	117	anti-parallel
Strand 3	A	124	129	anti-parallel
Strand 4	A	132	138	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	165	first strand
Strand 2	A	173	180	anti-parallel
Strand 3	A	183	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	205	first strand
Strand 2	A	208	214	anti-parallel
Strand 3	A	223	228	anti-parallel
Strand 4	A	233	238	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	276	first strand
Strand 2	A	283	286	anti-parallel
Strand 3	A	294	300	anti-parallel
Strand 4	A	314	324	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	23	first strand
Strand 2	B	362	372	anti-parallel
Strand 3	B	344	352	anti-parallel
Strand 4	B	328	331	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	46	first strand
Strand 2	B	49	60	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	94	98	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	106	first strand
Strand 2	B	111	117	anti-parallel
Strand 3	B	124	129	anti-parallel
Strand 4	B	132	138	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	165	first strand
Strand 2	B	173	180	anti-parallel
Strand 3	B	183	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	205	first strand
Strand 2	B	208	214	anti-parallel
Strand 3	B	223	228	anti-parallel
Strand 4	B	233	238	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	276	first strand
Strand 2	B	283	286	anti-parallel
Strand 3	B	294	300	anti-parallel
Strand 4	B	314	324	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	23	first strand
Strand 2	C	362	372	anti-parallel
Strand 3	C	343	352	anti-parallel
Strand 4	C	328	332	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	46	first strand
Strand 2	C	49	60	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	94	98	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	106	first strand
Strand 2	C	111	117	anti-parallel
Strand 3	C	124	129	anti-parallel
Strand 4	C	132	138	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	165	first strand
Strand 2	C	173	180	anti-parallel
Strand 3	C	183	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	205	first strand
Strand 2	C	208	214	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	233	238	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	276	first strand
Strand 2	C	283	286	anti-parallel
Strand 3	C	294	300	anti-parallel
Strand 4	C	314	324	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	23	first strand
Strand 2	D	362	372	anti-parallel
Strand 3	D	344	352	anti-parallel
Strand 4	D	328	331	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	46	first strand
Strand 2	D	49	60	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	94	98	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	101	106	first strand
Strand 2	D	111	117	anti-parallel
Strand 3	D	124	129	anti-parallel
Strand 4	D	132	138	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	165	first strand
Strand 2	D	173	180	anti-parallel
Strand 3	D	183	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	205	first strand
Strand 2	D	208	214	anti-parallel
Strand 3	D	223	228	anti-parallel
Strand 4	D	233	238	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	276	first strand
Strand 2	D	283	286	anti-parallel
Strand 3	D	294	300	anti-parallel
Strand 4	D	314	324	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HUM

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HUM