Analysis of interatomic Contacts of Structural Units in PDB entry:
5HUS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HUS entry

There is 1 chain in PDB entry 5HUS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1SER 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5HUS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 16Right-handed alpha
Helix 2
AA2
A
52 60Right-handed alpha
Helix 3
AA3
A
60 66Right-handed alpha
Helix 4
AA4
A
78 87Right-handed alpha
Helix 5
AA5
A
97 99Right-handed 310
Helix 6
AA6
A
115 137Right-handed alpha
Helix 7
AA7
A
155 160Right-handed alpha
Helix 8
AA8
A
160 180Right-handed alpha
Helix 9
AA9
A
199 214Right-handed alpha
Helix 10
AB1
A
217 224Right-handed alpha
Helix 11
AB2
A
224 230Right-handed alpha
Helix 12
AB3
A
253 266Right-handed alpha
Helix 13
AB4
A
267 269Right-handed 310
Helix 14
AB5
A
296 305Right-handed alpha
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There are 3 sheets in PDB entry 5HUS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
292 294parallel
Strand 3
A
272 278parallel
Strand 4
A
243 250parallel
Strand 5
A
20 26parallel
Strand 6
A
69 74parallel
Strand 7
A
93 96parallel
Strand 8
A
101 103anti-parallel
Strand 9
A
111 112anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
50 51parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 144first strand
Strand 2
A
149 152anti-parallel
Strand 3
A
192 197anti-parallel
Strand 4
A
184 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il