Analysis of interatomic Contacts of Structural Units in PDB entry:
5HV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HV3 entry

There is 1 chain in PDB entry 5HV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -7LEU 866
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5HV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 31Right-handed alpha
Helix 2
AA2
A
44 52Right-handed alpha
Helix 3
AA3
A
55 67Right-handed alpha
Helix 4
AA4
A
72 88Right-handed alpha
Helix 5
AA5
A
95 105Right-handed alpha
Helix 6
AA6
A
142 156Right-handed alpha
Helix 7
AA7
A
159 169Right-handed alpha
Helix 8
AA8
A
216 222Right-handed alpha
Helix 9
AA9
A
262 268Right-handed 310
Helix 10
AB1
A
272 291Right-handed alpha
Helix 11
AB2
A
333 337Right-handed alpha
Helix 12
AB3
A
344 353Right-handed alpha
Helix 13
AB4
A
371 375Right-handed 310
Helix 14
AB5
A
376 390Right-handed alpha
Helix 15
AB6
A
391 403Right-handed alpha
Helix 16
AB7
A
434 456Right-handed alpha
Helix 17
AB8
A
459 479Right-handed alpha
Helix 18
AB9
A
480 506Right-handed alpha
Helix 19
AC1
A
509 514Right-handed alpha
Helix 20
AC2
A
521 538Right-handed alpha
Helix 21
AC3
A
540 550Right-handed alpha
Helix 22
AC4
A
567 580Right-handed alpha
Helix 23
AC5
A
597 600Right-handed 310
Helix 24
AC6
A
601 612Right-handed alpha
Helix 25
AC7
A
616 640Right-handed alpha
Helix 26
AC8
A
644 663Right-handed alpha
Helix 27
AC9
A
667 694Right-handed alpha
Helix 28
AD1
A
699 704Right-handed 310
Helix 29
AD2
A
707 713Right-handed alpha
Helix 30
AD3
A
721 735Right-handed alpha
Helix 31
AD4
A
802 809Right-handed 310
Helix 32
AD5
A
824 833Right-handed alpha
Helix 33
AD6
A
848 852Right-handed 310
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There are 6 sheets in PDB entry 5HV3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
40 43anti-parallel
Strand 3
A
176 184anti-parallel
Strand 4
A
114 122anti-parallel
Strand 5
A
136 140anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 240first strand
Strand 2
A
227 232anti-parallel
Strand 3
A
206 213anti-parallel
Strand 4
A
190 195anti-parallel
Strand 5
A
295 301anti-parallel
Strand 6
A
304 307anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 250first strand
Strand 2
A
256 260anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 362first strand
Strand 2
A
365 369anti-parallel
Strand 3
A
329 332anti-parallel
Strand 4
A
743 745anti-parallel
Strand 5
A
750 751anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
765 766first strand
Strand 2
A
862 865anti-parallel
Strand 3
A
854 857anti-parallel
Strand 4
A
774 777anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
768 771first strand
Strand 2
A
837 839anti-parallel
Strand 3
A
812 817parallel
Strand 4
A
794 798parallel
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