Analysis of interatomic Contacts of Structural Units in PDB entry:
5HW2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HW2 entry

There are 4 chains in PDB entry 5HW2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	TYR 438
B	MET 1	ARG 433
C	MET 1	LYS 431
D	MET 1	LYS 3

There are 75 helices in PDB entry 5HW2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	6	Right-handed 310
Helix 2	AA2	A	7	14	Right-handed alpha
Helix 3	AA3	A	15	34	Right-handed alpha
Helix 4	AA4	A	35	37	Right-handed 310
Helix 5	AA5	A	42	50	Right-handed alpha
Helix 6	AA6	A	54	66	Right-handed alpha
Helix 7	AA7	A	67	78	Right-handed alpha
Helix 8	AA8	A	83	87	Right-handed 310
Helix 9	AA9	A	93	133	Right-handed alpha
Helix 10	AB1	A	150	174	Right-handed alpha
Helix 11	AB2	A	191	203	Right-handed alpha
Helix 12	AB3	A	216	245	Right-handed alpha
Helix 13	AB4	A	271	294	Right-handed alpha
Helix 14	AB5	A	303	334	Right-handed alpha
Helix 15	AB6	A	337	348	Right-handed alpha
Helix 16	AB7	A	350	364	Right-handed alpha
Helix 17	AB8	A	367	378	Right-handed alpha
Helix 18	AB9	A	387	399	Right-handed alpha
Helix 19	AC1	A	410	419	Right-handed alpha
Helix 20	AC2	A	421	430	Right-handed alpha
Helix 21	AC3	B	7	15	Right-handed alpha
Helix 22	AC4	B	15	35	Right-handed alpha
Helix 23	AC5	B	42	51	Right-handed alpha
Helix 24	AC6	B	54	66	Right-handed alpha
Helix 25	AC7	B	67	78	Right-handed alpha
Helix 26	AC8	B	93	131	Right-handed alpha
Helix 27	AC9	B	150	174	Right-handed alpha
Helix 28	AD1	B	191	203	Right-handed alpha
Helix 29	AD2	B	216	245	Right-handed alpha
Helix 30	AD3	B	271	287	Right-handed alpha
Helix 31	AD4	B	287	294	Right-handed alpha
Helix 32	AD5	B	303	333	Right-handed alpha
Helix 33	AD6	B	337	348	Right-handed alpha
Helix 34	AD7	B	351	363	Right-handed alpha
Helix 35	AD8	B	367	376	Right-handed alpha
Helix 36	AD9	B	387	398	Right-handed alpha
Helix 37	AE1	B	410	419	Right-handed alpha
Helix 38	AE2	B	421	430	Right-handed alpha
Helix 39	AE3	C	2	6	Right-handed 310
Helix 40	AE4	C	7	14	Right-handed alpha
Helix 41	AE5	C	15	34	Right-handed alpha
Helix 42	AE6	C	35	37	Right-handed 310
Helix 43	AE7	C	42	51	Right-handed alpha
Helix 44	AE8	C	54	66	Right-handed alpha
Helix 45	AE9	C	67	78	Right-handed alpha
Helix 46	AF1	C	93	131	Right-handed alpha
Helix 47	AF2	C	150	174	Right-handed alpha
Helix 48	AF3	C	191	203	Right-handed alpha
Helix 49	AF4	C	216	245	Right-handed alpha
Helix 50	AF5	C	271	294	Right-handed alpha
Helix 51	AF6	C	303	333	Right-handed alpha
Helix 52	AF7	C	337	348	Right-handed alpha
Helix 53	AF8	C	349	364	Right-handed alpha
Helix 54	AF9	C	367	378	Right-handed alpha
Helix 55	AG1	C	387	399	Right-handed alpha
Helix 56	AG2	C	410	419	Right-handed alpha
Helix 57	AG3	C	421	430	Right-handed alpha
Helix 58	AG4	D	7	15	Right-handed alpha
Helix 59	AG5	D	15	35	Right-handed alpha
Helix 60	AG6	D	42	51	Right-handed alpha
Helix 61	AG7	D	54	66	Right-handed alpha
Helix 62	AG8	D	67	78	Right-handed alpha
Helix 63	AG9	D	83	87	Right-handed 310
Helix 64	AH1	D	93	131	Right-handed alpha
Helix 65	AH2	D	150	173	Right-handed alpha
Helix 66	AH3	D	191	203	Right-handed alpha
Helix 67	AH4	D	216	245	Right-handed alpha
Helix 68	AH5	D	271	294	Right-handed alpha
Helix 69	AH6	D	303	333	Right-handed alpha
Helix 70	AH7	D	337	348	Right-handed alpha
Helix 71	AH8	D	351	364	Right-handed alpha
Helix 72	AH9	D	367	378	Right-handed alpha
Helix 73	AI1	D	387	399	Right-handed alpha
Helix 74	AI2	D	410	419	Right-handed alpha
Helix 75	AI3	D	421	430	Right-handed alpha

There are 8 sheets in PDB entry 5HW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	140	first strand
Strand 2	A	143	149	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	251	252	first strand
Strand 2	A	335	336	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	140	first strand
Strand 2	B	143	149	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	251	253	first strand
Strand 2	B	334	336	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	140	first strand
Strand 2	C	143	149	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	251	253	first strand
Strand 2	C	334	336	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	140	first strand
Strand 2	D	143	149	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	251	252	first strand
Strand 2	D	335	336	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HW2

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HW2