Analysis of interatomic Contacts of Structural Units in PDB entry:
5HWS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HWS entry

There are 4 chains in PDB entry 5HWS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASN 298
B	MET 1	ASN 298
C	MET 1	ARG 303
D	MET 1	ILE 297

There are 54 helices in PDB entry 5HWS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	22	Right-handed alpha
Helix 2	AA2	A	31	42	Right-handed alpha
Helix 3	AA3	A	74	76	Right-handed 310
Helix 4	AA4	A	77	86	Right-handed alpha
Helix 5	AA5	A	87	89	Right-handed 310
Helix 6	AA6	A	103	109	Right-handed alpha
Helix 7	AA7	A	150	163	Right-handed alpha
Helix 8	AA8	A	172	195	Right-handed alpha
Helix 9	AA9	A	199	204	Right-handed alpha
Helix 10	AB1	A	204	225	Right-handed alpha
Helix 11	AB2	A	232	244	Right-handed alpha
Helix 12	AB3	A	249	258	Right-handed alpha
Helix 13	AB4	A	266	277	Right-handed alpha
Helix 14	AB5	A	281	297	Right-handed alpha
Helix 15	AB6	B	9	22	Right-handed alpha
Helix 16	AB7	B	31	42	Right-handed alpha
Helix 17	AB8	B	74	76	Right-handed 310
Helix 18	AB9	B	77	86	Right-handed alpha
Helix 19	AC1	B	87	89	Right-handed 310
Helix 20	AC2	B	103	109	Right-handed alpha
Helix 21	AC3	B	150	163	Right-handed alpha
Helix 22	AC4	B	172	195	Right-handed alpha
Helix 23	AC5	B	199	204	Right-handed alpha
Helix 24	AC6	B	204	225	Right-handed alpha
Helix 25	AC7	B	232	244	Right-handed alpha
Helix 26	AC8	B	249	258	Right-handed alpha
Helix 27	AC9	B	266	277	Right-handed alpha
Helix 28	AD1	B	281	297	Right-handed alpha
Helix 29	AD2	C	9	22	Right-handed alpha
Helix 30	AD3	C	31	42	Right-handed alpha
Helix 31	AD4	C	77	85	Right-handed alpha
Helix 32	AD5	C	86	89	Right-handed 310
Helix 33	AD6	C	103	109	Right-handed alpha
Helix 34	AD7	C	150	163	Right-handed alpha
Helix 35	AD8	C	172	195	Right-handed alpha
Helix 36	AD9	C	199	204	Right-handed alpha
Helix 37	AE1	C	204	225	Right-handed alpha
Helix 38	AE2	C	232	244	Right-handed alpha
Helix 39	AE3	C	249	257	Right-handed alpha
Helix 40	AE4	C	266	277	Right-handed alpha
Helix 41	AE5	C	281	298	Right-handed alpha
Helix 42	AE6	D	9	22	Right-handed alpha
Helix 43	AE7	D	31	42	Right-handed alpha
Helix 44	AE8	D	77	86	Right-handed alpha
Helix 45	AE9	D	87	89	Right-handed 310
Helix 46	AF1	D	103	109	Right-handed alpha
Helix 47	AF2	D	150	163	Right-handed alpha
Helix 48	AF3	D	172	195	Right-handed alpha
Helix 49	AF4	D	199	204	Right-handed alpha
Helix 50	AF5	D	204	225	Right-handed alpha
Helix 51	AF6	D	232	244	Right-handed alpha
Helix 52	AF7	D	249	258	Right-handed alpha
Helix 53	AF8	D	266	277	Right-handed alpha
Helix 54	AF9	D	281	297	Right-handed alpha

There are 8 sheets in PDB entry 5HWS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	58	first strand
Strand 2	A	25	29	parallel
Strand 3	A	2	6	parallel
Strand 4	A	68	71	parallel
Strand 5	A	94	97	parallel
Strand 6	A	115	120	parallel
Strand 7	A	140	144	anti-parallel
Strand 8	A	167	169	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	53	first strand
Strand 2	A	43	47	anti-parallel
Strand 3	A	131	136	parallel
Strand 4	A	123	128	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	58	first strand
Strand 2	B	25	29	parallel
Strand 3	B	2	6	parallel
Strand 4	B	68	71	parallel
Strand 5	B	94	97	parallel
Strand 6	B	115	120	parallel
Strand 7	B	140	144	anti-parallel
Strand 8	B	167	169	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	53	first strand
Strand 2	B	43	47	anti-parallel
Strand 3	B	131	136	parallel
Strand 4	B	123	128	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	58	first strand
Strand 2	C	25	29	parallel
Strand 3	C	2	6	parallel
Strand 4	C	68	71	parallel
Strand 5	C	94	97	parallel
Strand 6	C	115	120	parallel
Strand 7	C	140	144	anti-parallel
Strand 8	C	167	169	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	53	first strand
Strand 2	C	43	47	anti-parallel
Strand 3	C	131	136	parallel
Strand 4	C	123	128	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	58	first strand
Strand 2	D	25	29	parallel
Strand 3	D	2	6	parallel
Strand 4	D	68	71	parallel
Strand 5	D	94	97	parallel
Strand 6	D	115	120	parallel
Strand 7	D	140	144	anti-parallel
Strand 8	D	167	169	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	53	first strand
Strand 2	D	43	47	anti-parallel
Strand 3	D	131	136	parallel
Strand 4	D	123	128	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HWS

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HWS