Analysis of interatomic Contacts of Structural Units in PDB entry:
5HX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HX0 entry

There are 2 chains in PDB entry 5HX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35ARG 399
B
 ILE 36ARG 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5HX0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
78 82Right-handed 310
Helix 2
AA2
A
145 152Right-handed alpha
Helix 3
AA3
B
78 82Right-handed 310
Helix 4
AA4
B
145 151Right-handed alpha
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There are 14 sheets in PDB entry 5HX0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 48first strand
Strand 2
A
390 398anti-parallel
Strand 3
A
375 382anti-parallel
Strand 4
A
364 372anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 62first strand
Strand 2
A
68 76anti-parallel
Strand 3
A
94 100anti-parallel
Strand 4
A
111 114anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
134 142anti-parallel
Strand 3
A
162 172anti-parallel
Strand 4
A
158 159anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
134 142anti-parallel
Strand 3
A
162 172anti-parallel
Strand 4
A
180 183anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
217 226anti-parallel
Strand 3
A
231 239anti-parallel
Strand 4
A
247 253anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 267first strand
Strand 2
A
273 280anti-parallel
Strand 3
A
285 291anti-parallel
Strand 4
A
302 307anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 315first strand
Strand 2
A
321 327anti-parallel
Strand 3
A
333 339anti-parallel
Strand 4
A
351 355anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 48first strand
Strand 2
B
390 398anti-parallel
Strand 3
B
375 382anti-parallel
Strand 4
B
364 372anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 62first strand
Strand 2
B
68 76anti-parallel
Strand 3
B
94 100anti-parallel
Strand 4
B
111 114anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 121first strand
Strand 2
B
134 142anti-parallel
Strand 3
B
162 172anti-parallel
Strand 4
B
158 159anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 128first strand
Strand 2
B
134 142anti-parallel
Strand 3
B
162 172anti-parallel
Strand 4
B
180 183anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 211first strand
Strand 2
B
217 226anti-parallel
Strand 3
B
231 239anti-parallel
Strand 4
B
247 253anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 267first strand
Strand 2
B
273 280anti-parallel
Strand 3
B
285 291anti-parallel
Strand 4
B
302 307anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 315first strand
Strand 2
B
321 327anti-parallel
Strand 3
B
333 339anti-parallel
Strand 4
B
351 355anti-parallel
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