Analysis of interatomic Contacts of Structural Units in PDB entry:
5HX2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HX2 entry

There are 9 chains in PDB entry 5HX2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 3	GLU 1032
B	MET 1	PHE 334
C	ASP 3	PHE 334
D	PRO 5	GLN 660
E	ALA 27	GLN 660
F	MET 1	TYR 192
G	MET 1	ALA 602
H	MET 1	ALA 602
I	MET 1	ALA 602

There are 77 helices in PDB entry 5HX2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	119	127	Right-handed alpha
Helix 2	AA2	A	159	164	Right-handed alpha
Helix 3	AA3	A	264	281	Right-handed alpha
Helix 4	AA4	A	420	426	Right-handed alpha
Helix 5	AA5	A	451	453	Right-handed 310
Helix 6	AA6	A	458	463	Right-handed alpha
Helix 7	AA7	A	510	514	Right-handed 310
Helix 8	AA8	A	518	522	Right-handed 310
Helix 9	AA9	A	645	651	Right-handed alpha
Helix 10	AB1	A	661	676	Right-handed alpha
Helix 11	AB2	A	681	688	Right-handed alpha
Helix 12	AB3	A	706	712	Right-handed alpha
Helix 13	AB4	A	716	724	Right-handed alpha
Helix 14	AB5	A	731	738	Right-handed alpha
Helix 15	AB6	A	743	751	Right-handed alpha
Helix 16	AB7	A	851	857	Right-handed alpha
Helix 17	AB8	A	875	880	Right-handed alpha
Helix 18	AB9	B	14	27	Right-handed alpha
Helix 19	AC1	B	64	75	Right-handed alpha
Helix 20	AC2	B	195	203	Right-handed alpha
Helix 21	AC3	B	231	235	Right-handed 310
Helix 22	AC4	C	13	25	Right-handed alpha
Helix 23	AC5	C	64	75	Right-handed alpha
Helix 24	AC6	C	82	84	Right-handed 310
Helix 25	AC7	C	149	155	Right-handed alpha
Helix 26	AC8	C	195	202	Right-handed alpha
Helix 27	AC9	C	220	224	Right-handed 310
Helix 28	AD1	C	262	267	Right-handed alpha
Helix 29	AD2	C	298	302	Right-handed 310
Helix 30	AD3	D	7	11	Right-handed 310
Helix 31	AD4	D	26	38	Right-handed alpha
Helix 32	AD5	D	51	60	Right-handed alpha
Helix 33	AD6	D	60	71	Right-handed alpha
Helix 34	AD7	D	73	79	Right-handed alpha
Helix 35	AD8	D	85	92	Right-handed alpha
Helix 36	AD9	D	277	281	Right-handed 310
Helix 37	AE1	D	321	335	Right-handed alpha
Helix 38	AE2	D	341	349	Right-handed alpha
Helix 39	AE3	D	388	400	Right-handed alpha
Helix 40	AE4	D	434	451	Right-handed alpha
Helix 41	AE5	D	460	469	Right-handed alpha
Helix 42	AE6	D	605	609	Right-handed 310
Helix 43	AE7	D	612	616	Right-handed 310
Helix 44	AE8	E	28	40	Right-handed alpha
Helix 45	AE9	E	53	76	Right-handed alpha
Helix 46	AF1	E	86	95	Right-handed alpha
Helix 47	AF2	E	277	281	Right-handed 310
Helix 48	AF3	E	303	307	Right-handed 310
Helix 49	AF4	E	321	333	Right-handed alpha
Helix 50	AF5	E	341	354	Right-handed alpha
Helix 51	AF6	E	388	394	Right-handed alpha
Helix 52	AF7	E	425	429	Right-handed 310
Helix 53	AF8	E	432	450	Right-handed alpha
Helix 54	AF9	E	460	470	Right-handed alpha
Helix 55	AG1	E	605	610	Right-handed 310
Helix 56	AG2	E	643	647	Right-handed 310
Helix 57	AG3	F	31	40	Right-handed alpha
Helix 58	AG4	F	73	78	Right-handed alpha
Helix 59	AG5	F	89	102	Right-handed alpha
Helix 60	AG6	F	155	165	Right-handed alpha
Helix 61	AG7	F	175	191	Right-handed alpha
Helix 62	AG8	G	22	27	Right-handed alpha
Helix 63	AG9	G	27	32	Right-handed alpha
Helix 64	AH1	G	42	47	Right-handed alpha
Helix 65	AH2	G	48	52	Right-handed 310
Helix 66	AH3	G	114	118	Right-handed 310
Helix 67	AH4	G	469	474	Right-handed alpha
Helix 68	AH5	H	22	37	Right-handed alpha
Helix 69	AH6	H	49	53	Right-handed 310
Helix 70	AH7	H	114	118	Right-handed 310
Helix 71	AH8	H	445	451	Right-handed alpha
Helix 72	AH9	H	496	501	Right-handed alpha
Helix 73	AI1	I	21	36	Right-handed alpha
Helix 74	AI2	I	49	53	Right-handed 310
Helix 75	AI3	I	114	118	Right-handed 310
Helix 76	AI4	I	445	454	Right-handed alpha
Helix 77	AI5	I	469	474	Right-handed alpha

There are 45 sheets in PDB entry 5HX2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	14	first strand
Strand 2	A	21	24	anti-parallel
Strand 3	A	68	69	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	62	first strand
Strand 2	A	33	38	anti-parallel
Strand 3	A	80	85	anti-parallel
Strand 4	A	95	96	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	118	first strand
Strand 2	A	596	597	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	175	first strand
Strand 2	A	532	535	anti-parallel
Strand 3	A	523	526	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	191	193	first strand
Strand 2	A	200	202	anti-parallel
Strand 3	A	209	211	anti-parallel
Strand 4	A	220	222	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	247	248	first strand
Strand 2	A	253	254	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	312	first strand
Strand 2	A	319	321	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	455	456	first strand
Strand 2	A	472	473	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	558	560	first strand
Strand 2	A	567	569	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	575	first strand
Strand 2	A	608	609	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	827	828	first strand
Strand 2	A	785	787	anti-parallel
Strand 3	A	792	797	anti-parallel
Strand 4	A	808	817	anti-parallel
Strand 5	A	767	773	anti-parallel
Strand 6	A	837	839	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	912	915	first strand
Strand 2	B	326	332	anti-parallel
Strand 3	B	247	253	anti-parallel
Strand 4	B	87	88	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1027	1028	first strand
Strand 2	C	6	7	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	10	first strand
Strand 2	C	309	314	anti-parallel
Strand 3	C	271	276	anti-parallel
Strand 4	C	37	40	anti-parallel
Strand 5	C	78	80	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	B	37	39	anti-parallel
Strand 3	B	274	276	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	94	first strand
Strand 2	B	112	113	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	136	first strand
Strand 2	B	187	189	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	209	first strand
Strand 2	C	86	91	anti-parallel
Strand 3	C	246	249	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	112	113	first strand
Strand 2	C	130	131	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	110	first strand
Strand 2	D	165	167	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	133	first strand
Strand 2	D	286	287	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	173	178	first strand
Strand 2	D	267	272	anti-parallel
Strand 3	D	200	201	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	225	226	first strand
Strand 2	D	236	237	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	362	364	first strand
Strand 2	D	372	374	anti-parallel
Strand 3	D	406	408	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	415	417	first strand
Strand 2	D	483	485	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	479	480	first strand
Strand 2	D	420	421	anti-parallel
Strand 3	D	653	654	parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	107	109	first strand
Strand 2	E	166	169	anti-parallel
Strand 3	E	143	148	anti-parallel
Strand 4	E	131	133	anti-parallel
Strand 5	E	287	288	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	115	first strand
Strand 2	E	296	301	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	171	173	first strand
Strand 2	E	271	274	anti-parallel
Strand 3	E	192	198	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	227	228	first strand
Strand 2	E	234	235	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	357	362	first strand
Strand 2	E	374	378	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	415	420	first strand
Strand 2	E	480	485	anti-parallel
Strand 3	E	624	625	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	541	542	first strand
Strand 2	E	551	554	anti-parallel
Strand 3	E	594	595	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	124	first strand
Strand 2	F	134	135	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	460	462	first strand
Strand 2	G	593	602	anti-parallel
Strand 3	G	477	481	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	460	462	first strand
Strand 2	G	593	602	anti-parallel
Strand 3	I	487	489	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	486	489	first strand
Strand 2	H	592	595	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	535	544	first strand
Strand 2	H	568	576	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	567	572	first strand
Strand 2	I	541	545	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	420	421	first strand
Strand 2	H	434	435	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	478	479	first strand
Strand 2	H	599	600	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	519	520	first strand
Strand 2	I	592	593	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	541	542	first strand
Strand 2	I	571	572	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	419	420	first strand
Strand 2	I	435	436	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	478	480	first strand
Strand 2	I	598	600	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HX2

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HX2