Analysis of interatomic Contacts of Structural Units in PDB entry:
5HXK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HXK entry

There are 3 chains in PDB entry 5HXK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0VAL 403
B
 HIS 0GLU 401
C
 HIS 0GLU 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 5HXK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 36Right-handed 310
Helix 2
AA2
A
42 52Right-handed alpha
Helix 3
AA3
A
60 70Right-handed alpha
Helix 4
AA4
A
90 92Right-handed 310
Helix 5
AA5
A
93 107Right-handed alpha
Helix 6
AA6
A
111 130Right-handed alpha
Helix 7
AA7
A
132 146Right-handed alpha
Helix 8
AA8
A
148 152Right-handed 310
Helix 9
AA9
A
157 164Right-handed alpha
Helix 10
AB1
A
165 177Right-handed alpha
Helix 11
AB2
A
191 199Right-handed alpha
Helix 12
AB3
A
200 205Right-handed 310
Helix 13
AB4
A
247 260Right-handed alpha
Helix 14
AB5
A
264 271Right-handed alpha
Helix 15
AB6
A
300 318Right-handed alpha
Helix 16
AB7
A
319 321Right-handed 310
Helix 17
AB8
A
323 344Right-handed alpha
Helix 18
AB9
A
344 360Right-handed alpha
Helix 19
AC1
A
364 374Right-handed alpha
Helix 20
AC2
A
376 387Right-handed alpha
Helix 21
AC3
B
32 36Right-handed 310
Helix 22
AC4
B
42 52Right-handed alpha
Helix 23
AC5
B
60 70Right-handed alpha
Helix 24
AC6
B
90 92Right-handed 310
Helix 25
AC7
B
93 107Right-handed alpha
Helix 26
AC8
B
113 130Right-handed alpha
Helix 27
AC9
B
132 146Right-handed alpha
Helix 28
AD1
B
148 152Right-handed 310
Helix 29
AD2
B
157 164Right-handed alpha
Helix 30
AD3
B
165 177Right-handed alpha
Helix 31
AD4
B
191 199Right-handed alpha
Helix 32
AD5
B
200 203Right-handed 310
Helix 33
AD6
B
247 260Right-handed alpha
Helix 34
AD7
B
264 271Right-handed alpha
Helix 35
AD8
B
300 318Right-handed alpha
Helix 36
AD9
B
319 321Right-handed 310
Helix 37
AE1
B
323 343Right-handed alpha
Helix 38
AE2
B
344 360Right-handed alpha
Helix 39
AE3
B
364 374Right-handed alpha
Helix 40
AE4
B
376 387Right-handed alpha
Helix 41
AE5
C
32 36Right-handed 310
Helix 42
AE6
C
42 52Right-handed alpha
Helix 43
AE7
C
60 70Right-handed alpha
Helix 44
AE8
C
90 92Right-handed 310
Helix 45
AE9
C
93 107Right-handed alpha
Helix 46
AF1
C
114 130Right-handed alpha
Helix 47
AF2
C
132 146Right-handed alpha
Helix 48
AF3
C
148 152Right-handed 310
Helix 49
AF4
C
157 164Right-handed alpha
Helix 50
AF5
C
165 177Right-handed alpha
Helix 51
AF6
C
191 199Right-handed alpha
Helix 52
AF7
C
200 203Right-handed 310
Helix 53
AF8
C
247 260Right-handed alpha
Helix 54
AF9
C
264 271Right-handed alpha
Helix 55
AG1
C
300 302Right-handed 310
Helix 56
AG2
C
303 318Right-handed alpha
Helix 57
AG3
C
319 321Right-handed 310
Helix 58
AG4
C
323 342Right-handed alpha
Helix 59
AG5
C
344 360Right-handed alpha
Helix 60
AG6
C
364 374Right-handed alpha
Helix 61
AG7
C
376 387Right-handed alpha
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There are 9 sheets in PDB entry 5HXK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
12 17anti-parallel
Strand 3
A
183 188parallel
Strand 4
A
23 29anti-parallel
Strand 5
A
83 89anti-parallel
Strand 6
A
73 78anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
58 59anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 226first strand
Strand 2
A
393 398parallel
Strand 3
A
232 240anti-parallel
Strand 4
A
291 299anti-parallel
Strand 5
A
280 284anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
12 17anti-parallel
Strand 3
B
183 188parallel
Strand 4
B
23 29anti-parallel
Strand 5
B
83 89anti-parallel
Strand 6
B
73 78anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 55first strand
Strand 2
B
58 59anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 226first strand
Strand 2
B
393 398parallel
Strand 3
B
232 240anti-parallel
Strand 4
B
291 299anti-parallel
Strand 5
B
280 284anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 6first strand
Strand 2
C
12 17anti-parallel
Strand 3
C
183 188parallel
Strand 4
C
23 29anti-parallel
Strand 5
C
83 89anti-parallel
Strand 6
C
73 78anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 55first strand
Strand 2
C
58 59anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
222 226first strand
Strand 2
C
393 398parallel
Strand 3
C
232 240anti-parallel
Strand 4
C
291 299anti-parallel
Strand 5
C
280 284anti-parallel
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