Analysis of interatomic Contacts of Structural Units in PDB entry:
5HXV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HXV entry

There are 12 chains in PDB entry 5HXV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 35SER 223
B
 CYS 35SER 223
C
 CYS 35SER 223
D
 CYS 35SER 223
E
 CYS 35SER 223
F
 CYS 35SER 223
G
 CYS 35SER 223
H
 CYS 35SER 223
I
 CYS 35SER 223
J
 CYS 35SER 223
K
 CYS 35SER 223
L
 CYS 35SER 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5HXV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
185 195Right-handed alpha
Helix 2
AA2
B
185 194Right-handed alpha
Helix 3
AA3
C
185 194Right-handed alpha
Helix 4
AA4
D
185 195Right-handed alpha
Helix 5
AA5
E
185 195Right-handed alpha
Helix 6
AA6
F
185 195Right-handed alpha
Helix 7
AA7
G
185 194Right-handed alpha
Helix 8
AA8
H
185 195Right-handed alpha
Helix 9
AA9
I
185 195Right-handed alpha
Helix 10
AB1
J
185 195Right-handed alpha
Helix 11
AB2
K
185 195Right-handed alpha
Helix 12
AB3
L
185 195Right-handed alpha
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There are 22 sheets in PDB entry 5HXV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 44first strand
Strand 2
A
47 53anti-parallel
Strand 3
A
78 85anti-parallel
Strand 4
A
201 223anti-parallel
Strand 5
A
92 114anti-parallel
Strand 6
A
118 126anti-parallel
Strand 7
A
165 174parallel
Strand 8
A
146 158anti-parallel
Strand 9
A
137 143anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
68 74anti-parallel
Strand 3
A
201 223anti-parallel
Strand 4
A
92 114anti-parallel
Strand 5
A
181 184anti-parallel
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There are 18 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 143first strand
Strand 2
B
146 158anti-parallel
Strand 3
B
165 174anti-parallel
Strand 4
B
118 126parallel
Strand 5
B
105 114anti-parallel
Strand 6
B
201 212anti-parallel
Strand 7
B
78 85anti-parallel
Strand 8
B
47 53anti-parallel
Strand 9
B
40 44anti-parallel
Strand 10
C
40 44anti-parallel
Strand 11
C
47 53anti-parallel
Strand 12
C
78 85anti-parallel
Strand 13
C
201 212anti-parallel
Strand 14
C
105 114anti-parallel
Strand 15
C
118 126anti-parallel
Strand 16
C
163 174parallel
Strand 17
C
146 160anti-parallel
Strand 18
C
137 143anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 63first strand
Strand 2
B
68 74anti-parallel
Strand 3
B
215 223anti-parallel
Strand 4
B
92 102anti-parallel
Strand 5
B
181 184anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
68 74anti-parallel
Strand 3
C
216 223anti-parallel
Strand 4
C
92 101anti-parallel
Strand 5
C
181 184anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 44first strand
Strand 2
D
47 53anti-parallel
Strand 3
D
78 85anti-parallel
Strand 4
D
201 212anti-parallel
Strand 5
D
104 114anti-parallel
Strand 6
D
118 126anti-parallel
Strand 7
D
165 174parallel
Strand 8
D
146 158anti-parallel
Strand 9
D
139 143anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 63first strand
Strand 2
D
67 74anti-parallel
Strand 3
D
216 223anti-parallel
Strand 4
D
92 101anti-parallel
Strand 5
D
181 184anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
40 44first strand
Strand 2
E
47 53anti-parallel
Strand 3
E
78 85anti-parallel
Strand 4
E
201 212anti-parallel
Strand 5
E
105 114anti-parallel
Strand 6
E
118 126anti-parallel
Strand 7
E
165 174parallel
Strand 8
E
146 158anti-parallel
Strand 9
E
139 143anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 63first strand
Strand 2
E
68 74anti-parallel
Strand 3
E
216 223anti-parallel
Strand 4
E
92 101anti-parallel
Strand 5
E
181 184anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
40 44first strand
Strand 2
F
47 53anti-parallel
Strand 3
F
78 85anti-parallel
Strand 4
F
201 212anti-parallel
Strand 5
F
105 114anti-parallel
Strand 6
F
118 126anti-parallel
Strand 7
F
165 174parallel
Strand 8
F
146 158anti-parallel
Strand 9
F
137 143anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
58 63first strand
Strand 2
F
68 74anti-parallel
Strand 3
F
215 223anti-parallel
Strand 4
F
92 102anti-parallel
Strand 5
F
181 184anti-parallel
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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
40 44first strand
Strand 2
G
47 53anti-parallel
Strand 3
G
78 85anti-parallel
Strand 4
G
201 212anti-parallel
Strand 5
G
105 114anti-parallel
Strand 6
G
118 126anti-parallel
Strand 7
G
165 174parallel
Strand 8
G
146 158anti-parallel
Strand 9
G
139 143anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
58 63first strand
Strand 2
G
68 74anti-parallel
Strand 3
G
216 223anti-parallel
Strand 4
G
92 101anti-parallel
Strand 5
G
181 184anti-parallel
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There are 18 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
139 143first strand
Strand 2
H
146 158anti-parallel
Strand 3
H
165 174anti-parallel
Strand 4
H
118 126parallel
Strand 5
H
105 114anti-parallel
Strand 6
H
201 212anti-parallel
Strand 7
H
78 85anti-parallel
Strand 8
H
47 53anti-parallel
Strand 9
H
40 44anti-parallel
Strand 10
J
40 44anti-parallel
Strand 11
J
47 53anti-parallel
Strand 12
J
78 85anti-parallel
Strand 13
J
201 212anti-parallel
Strand 14
J
104 114anti-parallel
Strand 15
J
118 126anti-parallel
Strand 16
J
165 174parallel
Strand 17
J
146 158anti-parallel
Strand 18
J
139 143anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
58 63first strand
Strand 2
H
68 74anti-parallel
Strand 3
H
216 223anti-parallel
Strand 4
H
92 101anti-parallel
Strand 5
H
181 184anti-parallel
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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
40 44first strand
Strand 2
I
47 53anti-parallel
Strand 3
I
78 85anti-parallel
Strand 4
I
201 212anti-parallel
Strand 5
I
105 114anti-parallel
Strand 6
I
118 126anti-parallel
Strand 7
I
163 174parallel
Strand 8
I
146 160anti-parallel
Strand 9
I
139 143anti-parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
58 63first strand
Strand 2
I
68 74anti-parallel
Strand 3
I
216 223anti-parallel
Strand 4
I
92 101anti-parallel
Strand 5
I
181 184anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
58 63first strand
Strand 2
J
68 74anti-parallel
Strand 3
J
216 223anti-parallel
Strand 4
J
92 101anti-parallel
Strand 5
J
181 184anti-parallel
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There are 9 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
40 44first strand
Strand 2
K
47 53anti-parallel
Strand 3
K
78 85anti-parallel
Strand 4
K
201 212anti-parallel
Strand 5
K
104 114anti-parallel
Strand 6
K
118 126anti-parallel
Strand 7
K
163 174parallel
Strand 8
K
146 160anti-parallel
Strand 9
K
139 143anti-parallel
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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
58 63first strand
Strand 2
K
68 74anti-parallel
Strand 3
K
216 223anti-parallel
Strand 4
K
92 101anti-parallel
Strand 5
K
181 184anti-parallel
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There are 9 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
40 44first strand
Strand 2
L
47 53anti-parallel
Strand 3
L
78 85anti-parallel
Strand 4
L
201 212anti-parallel
Strand 5
L
104 114anti-parallel
Strand 6
L
118 126anti-parallel
Strand 7
L
165 174parallel
Strand 8
L
146 158anti-parallel
Strand 9
L
139 143anti-parallel
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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
58 63first strand
Strand 2
L
68 74anti-parallel
Strand 3
L
216 223anti-parallel
Strand 4
L
92 101anti-parallel
Strand 5
L
181 184anti-parallel
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