Analysis of interatomic Contacts of Structural Units in PDB entry:
5HXW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HXW entry

There are 4 chains in PDB entry 5HXW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 39	PHE 471
B	ARG 40	PHE 471
C	GLY 42	PHE 471
D	GLY 42	LYS 53

There are102 helices in PDB entry 5HXW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	63	76	Right-handed alpha
Helix 2	AA2	A	91	95	Right-handed 310
Helix 3	AA3	A	109	122	Right-handed alpha
Helix 4	AA4	A	122	128	Right-handed alpha
Helix 5	AA5	A	144	161	Right-handed alpha
Helix 6	AA6	A	175	182	Right-handed alpha
Helix 7	AA7	A	205	217	Right-handed alpha
Helix 8	AA8	A	256	258	Right-handed 310
Helix 9	AA9	A	259	266	Right-handed alpha
Helix 10	AB1	A	324	329	Right-handed alpha
Helix 11	AB2	A	330	336	Right-handed 310
Helix 12	AB3	A	348	357	Right-handed alpha
Helix 13	AB4	A	367	372	Right-handed alpha
Helix 14	AB5	A	380	395	Right-handed alpha
Helix 15	AB6	A	396	401	Right-handed 310
Helix 16	AB7	A	438	456	Right-handed alpha
Helix 17	AB8	A	463	471	Right-handed 310
Helix 18	AB9	B	63	75	Right-handed alpha
Helix 19	AC1	B	91	95	Right-handed 310
Helix 20	AC2	B	109	122	Right-handed alpha
Helix 21	AC3	B	122	128	Right-handed alpha
Helix 22	AC4	B	144	161	Right-handed alpha
Helix 23	AC5	B	174	182	Right-handed alpha
Helix 24	AC6	B	205	218	Right-handed alpha
Helix 25	AC7	B	256	258	Right-handed 310
Helix 26	AC8	B	259	266	Right-handed alpha
Helix 27	AC9	B	323	329	Right-handed alpha
Helix 28	AD1	B	330	337	Right-handed 310
Helix 29	AD2	B	348	357	Right-handed alpha
Helix 30	AD3	B	367	372	Right-handed alpha
Helix 31	AD4	B	380	395	Right-handed alpha
Helix 32	AD5	B	396	399	Right-handed 310
Helix 33	AD6	B	438	456	Right-handed alpha
Helix 34	AD7	B	463	467	Right-handed 310
Helix 35	AD8	C	63	75	Right-handed alpha
Helix 36	AD9	C	91	95	Right-handed 310
Helix 37	AE1	C	106	122	Right-handed alpha
Helix 38	AE2	C	122	128	Right-handed alpha
Helix 39	AE3	C	144	161	Right-handed alpha
Helix 40	AE4	C	175	182	Right-handed alpha
Helix 41	AE5	C	205	217	Right-handed alpha
Helix 42	AE6	C	256	258	Right-handed 310
Helix 43	AE7	C	259	266	Right-handed alpha
Helix 44	AE8	C	323	329	Right-handed alpha
Helix 45	AE9	C	330	337	Right-handed 310
Helix 46	AF1	C	348	357	Right-handed alpha
Helix 47	AF2	C	367	372	Right-handed alpha
Helix 48	AF3	C	380	395	Right-handed alpha
Helix 49	AF4	C	396	399	Right-handed 310
Helix 50	AF5	C	438	455	Right-handed alpha
Helix 51	AF6	C	463	471	Right-handed 310
Helix 52	AF7	D	63	75	Right-handed alpha
Helix 53	AF8	D	91	95	Right-handed 310
Helix 54	AF9	D	106	121	Right-handed alpha
Helix 55	AG1	D	122	128	Right-handed alpha
Helix 56	AG2	D	144	160	Right-handed alpha
Helix 57	AG3	D	175	180	Right-handed alpha
Helix 58	AG4	D	205	218	Right-handed alpha
Helix 59	AG5	D	256	258	Right-handed 310
Helix 60	AG6	D	259	266	Right-handed alpha
Helix 61	AG7	D	322	326	Right-handed 310
Helix 62	AG8	D	328	338	Right-handed 310
Helix 63	AG9	D	348	357	Right-handed alpha
Helix 64	AH1	D	367	372	Right-handed alpha
Helix 65	AH2	D	380	395	Right-handed alpha
Helix 66	AH3	D	396	400	Right-handed 310
Helix 67	AH4	D	438	455	Right-handed alpha
Helix 68	AH5	D	463	467	Right-handed 310
Helix 69	AH6	E	63	76	Right-handed alpha
Helix 70	AH7	E	91	95	Right-handed 310
Helix 71	AH8	E	109	121	Right-handed alpha
Helix 72	AH9	E	122	128	Right-handed alpha
Helix 73	AI1	E	144	161	Right-handed alpha
Helix 74	AI2	E	175	182	Right-handed alpha
Helix 75	AI3	E	205	217	Right-handed alpha
Helix 76	AI4	E	256	258	Right-handed 310
Helix 77	AI5	E	259	266	Right-handed alpha
Helix 78	AI6	E	322	329	Right-handed alpha
Helix 79	AI7	E	330	337	Right-handed 310
Helix 80	AI8	E	348	357	Right-handed alpha
Helix 81	AI9	E	367	372	Right-handed alpha
Helix 82	AJ1	E	380	395	Right-handed alpha
Helix 83	AJ2	E	396	399	Right-handed 310
Helix 84	AJ3	E	438	456	Right-handed alpha
Helix 85	AJ4	E	463	471	Right-handed 310
Helix 86	AJ5	F	63	77	Right-handed alpha
Helix 87	AJ6	F	91	95	Right-handed 310
Helix 88	AJ7	F	106	122	Right-handed alpha
Helix 89	AJ8	F	122	128	Right-handed alpha
Helix 90	AJ9	F	144	161	Right-handed alpha
Helix 91	AK1	F	175	182	Right-handed alpha
Helix 92	AK2	F	205	218	Right-handed alpha
Helix 93	AK3	F	256	258	Right-handed 310
Helix 94	AK4	F	259	266	Right-handed alpha
Helix 95	AK5	F	322	328	Right-handed alpha
Helix 96	AK6	F	329	337	Right-handed 310
Helix 97	AK7	F	348	357	Right-handed alpha
Helix 98	AK8	F	367	372	Right-handed alpha
Helix 99	AK9	F	380	395	Right-handed alpha
Helix 100	AL1	F	396	399	Right-handed 310
Helix 101	AL2	F	438	456	Right-handed alpha
Helix 102	AL3	F	463	467	Right-handed 310

There are 30 sheets in PDB entry 5HXW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	222	first strand
Strand 2	A	80	83	parallel
Strand 3	A	57	60	parallel
Strand 4	A	252	254	parallel
Strand 5	A	430	434	parallel
Strand 6	A	420	423	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	100	first strand
Strand 2	A	199	200	anti-parallel
Strand 3	A	134	135	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	170	174	first strand
Strand 2	A	191	195	anti-parallel
Strand 3	A	138	140	anti-parallel
Strand 4	A	293	296	parallel
Strand 5	A	300	304	anti-parallel
Strand 6	A	310	312	anti-parallel
Strand 7	A	274	283	anti-parallel
Strand 8	A	403	413	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	233	first strand
Strand 2	A	236	242	anti-parallel
Strand 3	A	245	248	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	317	320	first strand
Strand 2	A	343	346	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	222	first strand
Strand 2	B	80	83	parallel
Strand 3	B	57	60	parallel
Strand 4	B	251	254	parallel
Strand 5	B	430	434	parallel
Strand 6	B	420	423	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	100	first strand
Strand 2	B	199	200	anti-parallel
Strand 3	B	134	135	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	173	first strand
Strand 2	B	192	195	anti-parallel
Strand 3	B	138	140	anti-parallel
Strand 4	B	293	296	parallel
Strand 5	B	300	304	anti-parallel
Strand 6	B	310	312	anti-parallel
Strand 7	B	274	283	anti-parallel
Strand 8	B	403	413	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	233	first strand
Strand 2	B	236	242	anti-parallel
Strand 3	B	246	248	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	320	first strand
Strand 2	B	343	346	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	222	first strand
Strand 2	C	80	83	parallel
Strand 3	C	57	60	parallel
Strand 4	C	251	254	parallel
Strand 5	C	430	434	parallel
Strand 6	C	420	423	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	99	100	first strand
Strand 2	C	199	200	anti-parallel
Strand 3	C	134	135	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	174	first strand
Strand 2	C	191	195	anti-parallel
Strand 3	C	138	140	anti-parallel
Strand 4	C	293	296	parallel
Strand 5	C	300	304	anti-parallel
Strand 6	C	310	312	anti-parallel
Strand 7	C	274	283	anti-parallel
Strand 8	C	403	413	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	233	first strand
Strand 2	C	236	242	anti-parallel
Strand 3	C	245	248	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	317	320	first strand
Strand 2	C	343	346	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	220	222	first strand
Strand 2	D	80	83	parallel
Strand 3	D	57	60	parallel
Strand 4	D	251	254	parallel
Strand 5	D	430	434	parallel
Strand 6	D	420	423	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	100	first strand
Strand 2	D	199	200	anti-parallel
Strand 3	D	134	135	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	173	first strand
Strand 2	D	192	195	anti-parallel
Strand 3	D	138	140	anti-parallel
Strand 4	D	293	296	parallel
Strand 5	D	300	304	anti-parallel
Strand 6	D	310	312	anti-parallel
Strand 7	D	274	283	anti-parallel
Strand 8	D	403	413	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	227	233	first strand
Strand 2	D	236	242	anti-parallel
Strand 3	D	245	248	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	317	320	first strand
Strand 2	D	343	346	parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	220	222	first strand
Strand 2	E	80	83	parallel
Strand 3	E	57	60	parallel
Strand 4	E	251	254	parallel
Strand 5	E	430	434	parallel
Strand 6	E	420	423	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	99	100	first strand
Strand 2	E	199	200	anti-parallel
Strand 3	E	134	135	anti-parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	170	174	first strand
Strand 2	E	191	195	anti-parallel
Strand 3	E	138	140	anti-parallel
Strand 4	E	293	295	parallel
Strand 5	E	301	304	anti-parallel
Strand 6	E	310	312	anti-parallel
Strand 7	E	274	283	anti-parallel
Strand 8	E	403	413	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	227	233	first strand
Strand 2	E	236	242	anti-parallel
Strand 3	E	245	248	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	317	320	first strand
Strand 2	E	343	346	parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	220	222	first strand
Strand 2	F	80	83	parallel
Strand 3	F	57	60	parallel
Strand 4	F	251	254	parallel
Strand 5	F	430	434	parallel
Strand 6	F	420	423	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	99	100	first strand
Strand 2	F	199	200	anti-parallel
Strand 3	F	134	135	anti-parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	170	173	first strand
Strand 2	F	192	195	anti-parallel
Strand 3	F	138	140	anti-parallel
Strand 4	F	293	296	parallel
Strand 5	F	300	304	anti-parallel
Strand 6	F	310	312	anti-parallel
Strand 7	F	274	283	anti-parallel
Strand 8	F	403	413	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	227	231	first strand
Strand 2	F	239	242	anti-parallel
Strand 3	F	247	248	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	317	320	first strand
Strand 2	F	343	346	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HXW

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HXW