Analysis of interatomic Contacts of Structural Units in PDB entry:
5HXZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HXZ entry

There are 4 chains in PDB entry 5HXZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 2	GLY 368
B	GLU 3	GLY 368
C	PRO 2	GLY 368
D	PRO 2	GLY 368

There are 55 helices in PDB entry 5HXZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	27	Right-handed alpha
Helix 2	AA2	A	31	33	Right-handed 310
Helix 3	AA3	A	51	68	Right-handed alpha
Helix 4	AA4	A	71	76	Right-handed alpha
Helix 5	AA5	A	101	105	Right-handed 310
Helix 6	AA6	A	130	148	Right-handed alpha
Helix 7	AA7	A	152	154	Right-handed 310
Helix 8	AA8	A	167	176	Right-handed alpha
Helix 9	AA9	A	185	205	Right-handed alpha
Helix 10	AB1	A	212	216	Right-handed 310
Helix 11	AB2	A	265	276	Right-handed alpha
Helix 12	AB3	A	285	289	Right-handed 310
Helix 13	AB4	A	314	318	Right-handed 310
Helix 14	AB5	A	322	340	Right-handed alpha
Helix 15	AB6	B	18	27	Right-handed alpha
Helix 16	AB7	B	31	33	Right-handed 310
Helix 17	AB8	B	51	68	Right-handed alpha
Helix 18	AB9	B	71	76	Right-handed alpha
Helix 19	AC1	B	101	105	Right-handed 310
Helix 20	AC2	B	130	148	Right-handed alpha
Helix 21	AC3	B	152	154	Right-handed 310
Helix 22	AC4	B	167	176	Right-handed alpha
Helix 23	AC5	B	185	205	Right-handed alpha
Helix 24	AC6	B	212	216	Right-handed 310
Helix 25	AC7	B	265	276	Right-handed alpha
Helix 26	AC8	B	285	289	Right-handed 310
Helix 27	AC9	B	314	318	Right-handed 310
Helix 28	AD1	B	322	340	Right-handed alpha
Helix 29	AD2	C	18	27	Right-handed alpha
Helix 30	AD3	C	31	33	Right-handed 310
Helix 31	AD4	C	51	68	Right-handed alpha
Helix 32	AD5	C	71	76	Right-handed alpha
Helix 33	AD6	C	101	105	Right-handed 310
Helix 34	AD7	C	130	148	Right-handed alpha
Helix 35	AD8	C	152	154	Right-handed 310
Helix 36	AD9	C	167	176	Right-handed alpha
Helix 37	AE1	C	185	205	Right-handed alpha
Helix 38	AE2	C	212	216	Right-handed 310
Helix 39	AE3	C	265	276	Right-handed alpha
Helix 40	AE4	C	285	289	Right-handed 310
Helix 41	AE5	C	322	340	Right-handed alpha
Helix 42	AE6	D	18	27	Right-handed alpha
Helix 43	AE7	D	31	33	Right-handed 310
Helix 44	AE8	D	51	68	Right-handed alpha
Helix 45	AE9	D	71	76	Right-handed alpha
Helix 46	AF1	D	101	105	Right-handed 310
Helix 47	AF2	D	130	148	Right-handed alpha
Helix 48	AF3	D	152	154	Right-handed 310
Helix 49	AF4	D	167	176	Right-handed alpha
Helix 50	AF5	D	185	205	Right-handed alpha
Helix 51	AF6	D	212	216	Right-handed 310
Helix 52	AF7	D	265	276	Right-handed alpha
Helix 53	AF8	D	285	289	Right-handed 310
Helix 54	AF9	D	314	318	Right-handed 310
Helix 55	AG1	D	322	340	Right-handed alpha

There are 16 sheets in PDB entry 5HXZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	11	first strand
Strand 2	A	93	99	anti-parallel
Strand 3	A	35	42	anti-parallel
Strand 4	A	80	84	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	122	first strand
Strand 2	A	237	247	anti-parallel
Strand 3	A	156	164	anti-parallel
Strand 4	A	227	232	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	260	first strand
Strand 2	A	359	366	anti-parallel
Strand 3	A	293	300	anti-parallel
Strand 4	A	345	348	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	308	first strand
Strand 2	A	311	312	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	11	first strand
Strand 2	B	93	99	anti-parallel
Strand 3	B	35	42	anti-parallel
Strand 4	B	80	84	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	122	first strand
Strand 2	B	237	247	anti-parallel
Strand 3	B	156	164	anti-parallel
Strand 4	B	227	232	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	260	first strand
Strand 2	B	359	366	anti-parallel
Strand 3	B	293	300	anti-parallel
Strand 4	B	345	348	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	308	first strand
Strand 2	B	311	312	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	11	first strand
Strand 2	C	93	100	anti-parallel
Strand 3	C	35	42	anti-parallel
Strand 4	C	80	84	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	122	first strand
Strand 2	C	237	247	anti-parallel
Strand 3	C	156	164	anti-parallel
Strand 4	C	227	232	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	253	260	first strand
Strand 2	C	359	366	anti-parallel
Strand 3	C	293	300	anti-parallel
Strand 4	C	345	348	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	308	first strand
Strand 2	C	311	312	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	11	first strand
Strand 2	D	93	100	anti-parallel
Strand 3	D	35	42	anti-parallel
Strand 4	D	80	84	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	122	first strand
Strand 2	D	237	247	anti-parallel
Strand 3	D	156	164	anti-parallel
Strand 4	D	227	232	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	253	260	first strand
Strand 2	D	359	366	anti-parallel
Strand 3	D	293	300	anti-parallel
Strand 4	D	345	348	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	307	308	first strand
Strand 2	D	311	312	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HXZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HXZ