Analysis of interatomic Contacts of Structural Units in PDB entry:
5HYZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HYZ entry

There is 1 chain in PDB entry 5HYZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 204ARG 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5HYZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
205 220Right-handed alpha
Helix 2
AA2
A
225 236Right-handed alpha
Helix 3
AA3
A
241 261Right-handed alpha
Helix 4
AA4
A
276 290Right-handed alpha
Helix 5
AA5
A
291 308Right-handed alpha
Helix 6
AA6
A
324 336Right-handed alpha
Helix 7
AA7
A
353 356Right-handed 310
Helix 8
AA8
A
359 377Right-handed alpha
Helix 9
AA9
A
389 393Right-handed 310
Helix 10
AB1
A
394 399Right-handed 310
Helix 11
AB2
A
413 418Right-handed 310
Helix 12
AB3
A
422 435Right-handed alpha
Helix 13
AB4
A
453 476Right-handed alpha
Helix 14
AB5
A
480 490Right-handed alpha
Helix 15
AB6
A
490 500Right-handed alpha
Helix 16
AB7
A
503 507Right-handed 310
Helix 17
AB8
A
513 524Right-handed alpha
Helix 18
AB9
A
534 543Right-handed alpha
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There are 2 sheets in PDB entry 5HYZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 385first strand
Strand 2
A
344 351parallel
Strand 3
A
313 321parallel
Strand 4
A
405 411parallel
Strand 5
A
439 445parallel
Strand 6
A
569 578anti-parallel
Strand 7
A
527 529anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 385first strand
Strand 2
A
344 351parallel
Strand 3
A
313 321parallel
Strand 4
A
405 411parallel
Strand 5
A
439 445parallel
Strand 6
A
569 578anti-parallel
Strand 7
A
561 566anti-parallel
Strand 8
A
552 557anti-parallel
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