Analysis of interatomic Contacts of Structural Units in PDB entry:
5HZ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HZ3 entry

There are 4 chains in PDB entry 5HZ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 CYS 61SER 688
A
 ASP 44ASP 44
A
 PRO 46PRO 52
A
 ARG 54ASN 56
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5HZ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
110 116Right-handed 310
Helix 2
AA2
B
134 140Right-handed 310
Helix 3
AA3
B
158 164Right-handed 310
Helix 4
AA4
B
182 188Right-handed 310
Helix 5
AA5
B
207 213Right-handed 310
Helix 6
AA6
B
231 237Right-handed 310
Helix 7
AA7
B
255 261Right-handed 310
Helix 8
AA8
B
279 285Right-handed 310
Helix 9
AA9
B
303 309Right-handed 310
Helix 10
AB1
B
327 333Right-handed 310
Helix 11
AB2
B
351 357Right-handed 310
Helix 12
AB3
B
375 381Right-handed 310
Helix 13
AB4
B
399 405Right-handed 310
Helix 14
AB5
B
423 429Right-handed 310
Helix 15
AB6
B
447 453Right-handed 310
Helix 16
AB7
B
471 477Right-handed 310
Helix 17
AB8
B
495 501Right-handed 310
Helix 18
AB9
B
519 523Right-handed 310
Helix 19
AC1
B
542 548Right-handed 310
Helix 20
AC2
B
566 572Right-handed 310
Helix 21
AC3
B
590 596Right-handed 310
Helix 22
AC4
B
615 621Right-handed 310
Helix 23
AC5
B
638 642Right-handed 310
Helix 24
AC6
B
671 677Right-handed alpha
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There are 5 sheets in PDB entry 5HZ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 26 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
74 80anti-parallel
Strand 3
B
97 101parallel
Strand 4
B
121 123parallel
Strand 5
B
145 147parallel
Strand 6
B
169 171parallel
Strand 7
B
193 195parallel
Strand 8
B
218 220parallel
Strand 9
B
242 244parallel
Strand 10
B
266 268parallel
Strand 11
B
290 292parallel
Strand 12
B
314 316parallel
Strand 13
B
338 340parallel
Strand 14
B
362 364parallel
Strand 15
B
386 388parallel
Strand 16
B
410 412parallel
Strand 17
B
434 436parallel
Strand 18
B
458 460parallel
Strand 19
B
482 484parallel
Strand 20
B
506 508parallel
Strand 21
B
529 531parallel
Strand 22
B
553 555parallel
Strand 23
B
577 579parallel
Strand 24
B
602 604parallel
Strand 25
B
626 628parallel
Strand 26
B
649 651parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 180first strand
Strand 2
B
201 203parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 228first strand
Strand 2
B
249 250parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
562 563first strand
Strand 2
B
584 585parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
658 661first strand
Strand 2
B
680 683parallel
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