Analysis of interatomic Contacts of Structural Units in PDB entry:
5HZG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HZG entry

There are 6 chains in PDB entry 5HZG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 5	PRO 266
B	LEU 20	ASP 719
C	LEU 8	GLU 160
E	ASN 5	PRO 266
F	ILE 17	ASP 719
G	LEU 8	GLU 160

There are 87 helices in PDB entry 5HZG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	10	Right-handed alpha
Helix 2	AA2	A	31	36	Right-handed 310
Helix 3	AA3	A	38	42	Right-handed 310
Helix 4	AA4	A	72	87	Right-handed alpha
Helix 5	AA5	A	97	110	Right-handed alpha
Helix 6	AA6	A	137	156	Right-handed alpha
Helix 7	AA7	A	171	178	Right-handed alpha
Helix 8	AA8	A	179	182	Right-handed 310
Helix 9	AA9	A	183	196	Right-handed alpha
Helix 10	AB1	A	202	206	Right-handed 310
Helix 11	AB2	A	225	233	Right-handed alpha
Helix 12	AB3	A	253	264	Right-handed alpha
Helix 13	AB4	B	24	30	Right-handed alpha
Helix 14	AB5	B	34	41	Right-handed alpha
Helix 15	AB6	B	46	51	Right-handed alpha
Helix 16	AB7	B	129	143	Right-handed alpha
Helix 17	AB8	B	156	161	Right-handed alpha
Helix 18	AB9	B	162	167	Right-handed alpha
Helix 19	AC1	B	191	198	Right-handed alpha
Helix 20	AC2	B	212	222	Right-handed alpha
Helix 21	AC3	B	223	228	Right-handed alpha
Helix 22	AC4	B	245	256	Right-handed alpha
Helix 23	AC5	B	277	288	Right-handed alpha
Helix 24	AC6	B	314	325	Right-handed alpha
Helix 25	AC7	B	342	353	Right-handed alpha
Helix 26	AC8	B	393	400	Right-handed alpha
Helix 27	AC9	B	401	404	Right-handed 310
Helix 28	AD1	B	421	430	Right-handed alpha
Helix 29	AD2	B	535	540	Right-handed alpha
Helix 30	AD3	B	559	563	Right-handed 310
Helix 31	AD4	B	573	579	Right-handed 310
Helix 32	AD5	B	606	616	Right-handed alpha
Helix 33	AD6	B	617	621	Right-handed 310
Helix 34	AD7	B	643	652	Right-handed alpha
Helix 35	AD8	B	666	671	Right-handed alpha
Helix 36	AD9	B	672	676	Right-handed 310
Helix 37	AE1	B	702	714	Right-handed alpha
Helix 38	AE2	C	48	71	Right-handed alpha
Helix 39	AE3	C	85	91	Right-handed alpha
Helix 40	AE4	C	98	108	Right-handed alpha
Helix 41	AE5	C	110	123	Right-handed alpha
Helix 42	AE6	C	129	137	Right-handed alpha
Helix 43	AE7	C	144	153	Right-handed alpha
Helix 44	AE8	C	154	158	Right-handed 310
Helix 45	AE9	E	6	10	Right-handed alpha
Helix 46	AF1	E	31	42	Right-handed 310
Helix 47	AF2	E	60	64	Right-handed 310
Helix 48	AF3	E	72	86	Right-handed alpha
Helix 49	AF4	E	98	110	Right-handed alpha
Helix 50	AF5	E	138	157	Right-handed alpha
Helix 51	AF6	E	170	177	Right-handed alpha
Helix 52	AF7	E	178	182	Right-handed 310
Helix 53	AF8	E	183	196	Right-handed alpha
Helix 54	AF9	E	224	233	Right-handed alpha
Helix 55	AG1	E	248	253	Right-handed alpha
Helix 56	AG2	E	253	263	Right-handed alpha
Helix 57	AG3	F	21	30	Right-handed alpha
Helix 58	AG4	F	35	41	Right-handed alpha
Helix 59	AG5	F	46	51	Right-handed alpha
Helix 60	AG6	F	51	56	Right-handed alpha
Helix 61	AG7	F	88	90	Right-handed 310
Helix 62	AG8	F	130	143	Right-handed alpha
Helix 63	AG9	F	156	163	Right-handed alpha
Helix 64	AH1	F	164	167	Right-handed 310
Helix 65	AH2	F	191	198	Right-handed alpha
Helix 66	AH3	F	212	223	Right-handed alpha
Helix 67	AH4	F	223	230	Right-handed alpha
Helix 68	AH5	F	245	256	Right-handed alpha
Helix 69	AH6	F	277	288	Right-handed alpha
Helix 70	AH7	F	314	324	Right-handed alpha
Helix 71	AH8	F	342	353	Right-handed alpha
Helix 72	AH9	F	393	398	Right-handed alpha
Helix 73	AI1	F	419	430	Right-handed alpha
Helix 74	AI2	F	454	458	Right-handed 310
Helix 75	AI3	F	535	541	Right-handed alpha
Helix 76	AI4	F	573	578	Right-handed 310
Helix 77	AI5	F	606	616	Right-handed alpha
Helix 78	AI6	F	643	653	Right-handed alpha
Helix 79	AI7	F	666	671	Right-handed alpha
Helix 80	AI8	F	672	675	Right-handed 310
Helix 81	AI9	F	702	714	Right-handed alpha
Helix 82	AJ1	G	48	68	Right-handed alpha
Helix 83	AJ2	G	84	91	Right-handed alpha
Helix 84	AJ3	G	99	109	Right-handed alpha
Helix 85	AJ4	G	110	126	Right-handed alpha
Helix 86	AJ5	G	129	137	Right-handed alpha
Helix 87	AJ6	G	144	156	Right-handed alpha

There are 9 sheets in PDB entry 5HZG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	14	first strand
Strand 2	A	47	51	anti-parallel
Strand 3	A	21	25	parallel
Strand 4	A	91	95	parallel
Strand 5	A	114	120	parallel
Strand 6	A	210	214	parallel
Strand 7	A	237	241	parallel

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There are 20 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	63	first strand
Strand 2	B	84	87	parallel
Strand 3	B	148	151	parallel
Strand 4	B	172	177	parallel
Strand 5	B	203	209	parallel
Strand 6	B	232	234	parallel
Strand 7	B	261	265	parallel
Strand 8	B	293	297	parallel
Strand 9	B	330	334	parallel
Strand 10	B	359	363	parallel
Strand 11	B	383	388	parallel
Strand 12	B	409	412	parallel
Strand 13	B	435	438	parallel
Strand 14	B	461	465	parallel
Strand 15	B	524	530	parallel
Strand 16	B	551	557	parallel
Strand 17	B	588	589	parallel
Strand 18	B	626	630	parallel
Strand 19	B	658	661	parallel
Strand 20	B	681	684	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	594	595	first strand
Strand 2	B	633	634	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	14	first strand
Strand 2	E	47	50	anti-parallel
Strand 3	E	21	25	parallel
Strand 4	E	91	95	parallel
Strand 5	E	114	120	parallel
Strand 6	E	210	214	parallel
Strand 7	E	237	241	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	127	128	first strand
Strand 2	E	136	137	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	61	63	first strand
Strand 2	F	84	86	parallel
Strand 3	F	149	152	parallel
Strand 4	F	172	177	parallel
Strand 5	F	208	209	parallel

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There are 16 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	61	63	first strand
Strand 2	F	84	86	parallel
Strand 3	F	149	152	parallel
Strand 4	F	172	177	parallel
Strand 5	F	203	205	parallel
Strand 6	F	232	234	parallel
Strand 7	F	261	265	parallel
Strand 8	F	293	297	parallel
Strand 9	F	330	339	parallel
Strand 10	F	358	364	parallel
Strand 11	F	383	386	parallel
Strand 12	F	409	412	parallel
Strand 13	F	435	438	parallel
Strand 14	F	461	465	parallel
Strand 15	F	524	529	parallel
Strand 16	F	554	556	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	558	559	first strand
Strand 2	F	593	594	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	586	589	first strand
Strand 2	F	626	630	parallel
Strand 3	F	658	661	parallel
Strand 4	F	681	684	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HZG

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HZG