Analysis of interatomic Contacts of Structural Units in PDB entry:
5HZN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5HZN entry

There are 8 chains in PDB entry 5HZN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 980	LYS 1283
B	ALA 980	LYS 1283
C	ALA 980	LYS 1283
D	ALA 980	LYS 1283
E	ALA 980	LYS 1283
F	ALA 980	LYS 1283
G	ALA 980	LYS 1283
H	ALA 980	ASN 1282

There are124 helices in PDB entry 5HZN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	992	994	Right-handed 310
Helix 2	AA2	A	1037	1052	Right-handed alpha
Helix 3	AA3	A	1083	1091	Right-handed alpha
Helix 4	AA4	A	1105	1126	Right-handed alpha
Helix 5	AA5	A	1134	1136	Right-handed 310
Helix 6	AA6	A	1172	1176	Right-handed 310
Helix 7	AA7	A	1177	1184	Right-handed alpha
Helix 8	AA8	A	1187	1205	Right-handed alpha
Helix 9	AA9	A	1214	1224	Right-handed alpha
Helix 10	AB1	A	1235	1246	Right-handed alpha
Helix 11	AB2	A	1249	1253	Right-handed 310
Helix 12	AB3	A	1255	1264	Right-handed alpha
Helix 13	AB4	A	1265	1267	Right-handed 310
Helix 14	AB5	A	1268	1269	Right-handed 310
Helix 15	AB6	A	1270	1275	Right-handed alpha
Helix 16	AB7	B	992	994	Right-handed 310
Helix 17	AB8	B	1037	1051	Right-handed alpha
Helix 18	AB9	B	1052	1054	Right-handed 310
Helix 19	AC1	B	1083	1091	Right-handed alpha
Helix 20	AC2	B	1105	1126	Right-handed alpha
Helix 21	AC3	B	1134	1136	Right-handed 310
Helix 22	AC4	B	1172	1176	Right-handed 310
Helix 23	AC5	B	1177	1184	Right-handed alpha
Helix 24	AC6	B	1187	1205	Right-handed alpha
Helix 25	AC7	B	1214	1224	Right-handed alpha
Helix 26	AC8	B	1235	1246	Right-handed alpha
Helix 27	AC9	B	1249	1253	Right-handed 310
Helix 28	AD1	B	1255	1262	Right-handed alpha
Helix 29	AD2	B	1263	1267	Right-handed 310
Helix 30	AD3	B	1268	1269	Right-handed 310
Helix 31	AD4	B	1270	1275	Right-handed alpha
Helix 32	AD5	C	992	994	Right-handed 310
Helix 33	AD6	C	1037	1052	Right-handed alpha
Helix 34	AD7	C	1083	1091	Right-handed alpha
Helix 35	AD8	C	1105	1126	Right-handed alpha
Helix 36	AD9	C	1134	1136	Right-handed 310
Helix 37	AE1	C	1172	1176	Right-handed 310
Helix 38	AE2	C	1177	1184	Right-handed alpha
Helix 39	AE3	C	1187	1205	Right-handed alpha
Helix 40	AE4	C	1214	1224	Right-handed alpha
Helix 41	AE5	C	1235	1246	Right-handed alpha
Helix 42	AE6	C	1249	1253	Right-handed 310
Helix 43	AE7	C	1255	1264	Right-handed alpha
Helix 44	AE8	C	1265	1267	Right-handed 310
Helix 45	AE9	C	1268	1269	Right-handed 310
Helix 46	AF1	C	1270	1275	Right-handed alpha
Helix 47	AF2	D	992	994	Right-handed 310
Helix 48	AF3	D	1037	1051	Right-handed alpha
Helix 49	AF4	D	1052	1054	Right-handed 310
Helix 50	AF5	D	1083	1091	Right-handed alpha
Helix 51	AF6	D	1105	1126	Right-handed alpha
Helix 52	AF7	D	1134	1136	Right-handed 310
Helix 53	AF8	D	1172	1176	Right-handed 310
Helix 54	AF9	D	1177	1184	Right-handed alpha
Helix 55	AG1	D	1187	1205	Right-handed alpha
Helix 56	AG2	D	1214	1224	Right-handed alpha
Helix 57	AG3	D	1235	1246	Right-handed alpha
Helix 58	AG4	D	1249	1253	Right-handed 310
Helix 59	AG5	D	1255	1264	Right-handed alpha
Helix 60	AG6	D	1265	1267	Right-handed 310
Helix 61	AG7	D	1268	1269	Right-handed 310
Helix 62	AG8	D	1270	1275	Right-handed alpha
Helix 63	AG9	E	992	994	Right-handed 310
Helix 64	AH1	E	1037	1052	Right-handed alpha
Helix 65	AH2	E	1083	1091	Right-handed alpha
Helix 66	AH3	E	1105	1126	Right-handed alpha
Helix 67	AH4	E	1134	1136	Right-handed 310
Helix 68	AH5	E	1172	1176	Right-handed 310
Helix 69	AH6	E	1177	1184	Right-handed alpha
Helix 70	AH7	E	1187	1205	Right-handed alpha
Helix 71	AH8	E	1214	1224	Right-handed alpha
Helix 72	AH9	E	1235	1246	Right-handed alpha
Helix 73	AI1	E	1249	1253	Right-handed 310
Helix 74	AI2	E	1255	1264	Right-handed alpha
Helix 75	AI3	E	1265	1267	Right-handed 310
Helix 76	AI4	E	1268	1269	Right-handed 310
Helix 77	AI5	E	1270	1275	Right-handed alpha
Helix 78	AI6	F	992	994	Right-handed 310
Helix 79	AI7	F	1037	1051	Right-handed alpha
Helix 80	AI8	F	1052	1054	Right-handed 310
Helix 81	AI9	F	1083	1091	Right-handed alpha
Helix 82	AJ1	F	1105	1126	Right-handed alpha
Helix 83	AJ2	F	1134	1136	Right-handed 310
Helix 84	AJ3	F	1172	1176	Right-handed 310
Helix 85	AJ4	F	1177	1184	Right-handed alpha
Helix 86	AJ5	F	1187	1205	Right-handed alpha
Helix 87	AJ6	F	1214	1224	Right-handed alpha
Helix 88	AJ7	F	1235	1246	Right-handed alpha
Helix 89	AJ8	F	1249	1253	Right-handed 310
Helix 90	AJ9	F	1255	1264	Right-handed alpha
Helix 91	AK1	F	1265	1267	Right-handed 310
Helix 92	AK2	F	1268	1269	Right-handed 310
Helix 93	AK3	F	1270	1275	Right-handed alpha
Helix 94	AK4	G	992	994	Right-handed 310
Helix 95	AK5	G	1037	1052	Right-handed alpha
Helix 96	AK6	G	1083	1091	Right-handed alpha
Helix 97	AK7	G	1105	1126	Right-handed alpha
Helix 98	AK8	G	1134	1136	Right-handed 310
Helix 99	AK9	G	1172	1176	Right-handed 310
Helix 100	AL1	G	1177	1184	Right-handed alpha
Helix 101	AL2	G	1187	1205	Right-handed alpha
Helix 102	AL3	G	1214	1224	Right-handed alpha
Helix 103	AL4	G	1235	1246	Right-handed alpha
Helix 104	AL5	G	1249	1253	Right-handed 310
Helix 105	AL6	G	1255	1264	Right-handed alpha
Helix 106	AL7	G	1265	1267	Right-handed 310
Helix 107	AL8	G	1268	1269	Right-handed 310
Helix 108	AL9	G	1270	1275	Right-handed alpha
Helix 109	AM1	H	992	994	Right-handed 310
Helix 110	AM2	H	1037	1051	Right-handed alpha
Helix 111	AM3	H	1052	1054	Right-handed 310
Helix 112	AM4	H	1083	1091	Right-handed alpha
Helix 113	AM5	H	1105	1126	Right-handed alpha
Helix 114	AM6	H	1134	1136	Right-handed 310
Helix 115	AM7	H	1172	1176	Right-handed 310
Helix 116	AM8	H	1177	1184	Right-handed alpha
Helix 117	AM9	H	1187	1204	Right-handed alpha
Helix 118	AN1	H	1214	1224	Right-handed alpha
Helix 119	AN2	H	1235	1246	Right-handed alpha
Helix 120	AN3	H	1249	1253	Right-handed 310
Helix 121	AN4	H	1255	1264	Right-handed alpha
Helix 122	AN5	H	1265	1267	Right-handed 310
Helix 123	AN6	H	1268	1269	Right-handed 310
Helix 124	AN7	H	1270	1275	Right-handed alpha

There are 24 sheets in PDB entry 5HZN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	996	1004	first strand
Strand 2	A	1009	1016	anti-parallel
Strand 3	A	1024	1030	anti-parallel
Strand 4	A	1073	1077	anti-parallel
Strand 5	A	1062	1066	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1138	1140	first strand
Strand 2	A	1146	1148	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1163	1164	first strand
Strand 2	B	1170	1171	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1170	1171	first strand
Strand 2	D	1163	1164	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	996	1004	first strand
Strand 2	B	1009	1019	anti-parallel
Strand 3	B	1022	1031	anti-parallel
Strand 4	B	1073	1077	anti-parallel
Strand 5	B	1062	1066	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1138	1140	first strand
Strand 2	B	1146	1148	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1163	1164	first strand
Strand 2	C	1170	1171	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	996	1004	first strand
Strand 2	C	1009	1019	anti-parallel
Strand 3	C	1022	1031	anti-parallel
Strand 4	C	1073	1077	anti-parallel
Strand 5	C	1062	1066	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1138	1140	first strand
Strand 2	C	1146	1148	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1163	1164	first strand
Strand 2	D	1170	1171	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	996	1004	first strand
Strand 2	D	1009	1019	anti-parallel
Strand 3	D	1022	1031	anti-parallel
Strand 4	D	1073	1077	anti-parallel
Strand 5	D	1062	1066	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1138	1140	first strand
Strand 2	D	1146	1148	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	996	1004	first strand
Strand 2	E	1009	1016	anti-parallel
Strand 3	E	1024	1030	anti-parallel
Strand 4	E	1073	1077	anti-parallel
Strand 5	E	1062	1066	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1138	1140	first strand
Strand 2	E	1146	1148	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1163	1164	first strand
Strand 2	F	1170	1171	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1170	1171	first strand
Strand 2	H	1163	1164	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	996	1004	first strand
Strand 2	F	1009	1019	anti-parallel
Strand 3	F	1022	1031	anti-parallel
Strand 4	F	1073	1077	anti-parallel
Strand 5	F	1062	1066	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1138	1140	first strand
Strand 2	F	1146	1148	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1163	1164	first strand
Strand 2	G	1170	1171	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	996	1004	first strand
Strand 2	G	1009	1019	anti-parallel
Strand 3	G	1022	1031	anti-parallel
Strand 4	G	1073	1077	anti-parallel
Strand 5	G	1062	1066	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1138	1140	first strand
Strand 2	G	1146	1148	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1163	1164	first strand
Strand 2	H	1170	1171	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	996	1004	first strand
Strand 2	H	1009	1019	anti-parallel
Strand 3	H	1022	1031	anti-parallel
Strand 4	H	1073	1077	anti-parallel
Strand 5	H	1062	1066	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1138	1140	first strand
Strand 2	H	1146	1148	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5HZN

Analysis of interatomic Contacts of Structural Units in PDB entry:
5HZN