Analysis of interatomic Contacts of Structural Units in PDB entry:
5I0H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5I0H entry

There are 2 chains in PDB entry 5I0H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 3	GLU 741
B	THR 6	ASP 517

There are 66 helices in PDB entry 5I0H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	47	49	Right-handed 310
Helix 2	AA2	A	67	71	Right-handed 310
Helix 3	AA3	A	75	89	Right-handed alpha
Helix 4	AA4	A	114	123	Right-handed alpha
Helix 5	AA5	A	132	147	Right-handed alpha
Helix 6	AA6	A	162	181	Right-handed alpha
Helix 7	AA7	A	185	191	Right-handed alpha
Helix 8	AA8	A	192	208	Right-handed alpha
Helix 9	AA9	A	246	251	Right-handed 310
Helix 10	AB1	A	260	270	Right-handed alpha
Helix 11	AB2	A	271	278	Right-handed alpha
Helix 12	AB3	A	282	285	Right-handed 310
Helix 13	AB4	A	286	291	Right-handed alpha
Helix 14	AB5	A	301	316	Right-handed alpha
Helix 15	AB6	A	319	337	Right-handed alpha
Helix 16	AB7	A	351	363	Right-handed alpha
Helix 17	AB8	A	365	374	Right-handed alpha
Helix 18	AB9	A	390	422	Right-handed alpha
Helix 19	AC1	A	445	467	Right-handed alpha
Helix 20	AC2	A	467	477	Right-handed alpha
Helix 21	AC3	A	489	498	Right-handed alpha
Helix 22	AC4	A	501	511	Right-handed alpha
Helix 23	AC5	A	516	529	Right-handed alpha
Helix 24	AC6	A	559	566	Right-handed alpha
Helix 25	AC7	A	569	578	Right-handed alpha
Helix 26	AC8	A	581	589	Right-handed alpha
Helix 27	AC9	A	610	628	Right-handed alpha
Helix 28	AD1	A	649	660	Right-handed alpha
Helix 29	AD2	A	661	672	Right-handed alpha
Helix 30	AD3	A	679	687	Right-handed alpha
Helix 31	AD4	A	688	691	Right-handed 310
Helix 32	AD5	A	698	711	Right-handed alpha
Helix 33	AD6	A	727	741	Right-handed alpha
Helix 34	AD7	B	45	49	Right-handed 310
Helix 35	AD8	B	67	71	Right-handed 310
Helix 36	AD9	B	75	89	Right-handed alpha
Helix 37	AE1	B	114	123	Right-handed alpha
Helix 38	AE2	B	132	147	Right-handed alpha
Helix 39	AE3	B	162	181	Right-handed alpha
Helix 40	AE4	B	185	192	Right-handed alpha
Helix 41	AE5	B	192	208	Right-handed alpha
Helix 42	AE6	B	246	251	Right-handed 310
Helix 43	AE7	B	260	270	Right-handed alpha
Helix 44	AE8	B	271	278	Right-handed alpha
Helix 45	AE9	B	282	285	Right-handed 310
Helix 46	AF1	B	286	291	Right-handed alpha
Helix 47	AF2	B	298	316	Right-handed alpha
Helix 48	AF3	B	319	337	Right-handed alpha
Helix 49	AF4	B	352	363	Right-handed alpha
Helix 50	AF5	B	365	374	Right-handed alpha
Helix 51	AF6	B	390	422	Right-handed alpha
Helix 52	AF7	B	445	467	Right-handed alpha
Helix 53	AF8	B	467	477	Right-handed alpha
Helix 54	AF9	B	489	498	Right-handed alpha
Helix 55	AG1	B	501	511	Right-handed alpha
Helix 56	AG2	B	516	529	Right-handed alpha
Helix 57	AG3	B	559	566	Right-handed alpha
Helix 58	AG4	B	569	578	Right-handed alpha
Helix 59	AG5	B	581	589	Right-handed alpha
Helix 60	AG6	B	610	628	Right-handed alpha
Helix 61	AG7	B	649	660	Right-handed alpha
Helix 62	AG8	B	661	672	Right-handed alpha
Helix 63	AG9	B	679	687	Right-handed alpha
Helix 64	AH1	B	688	691	Right-handed 310
Helix 65	AH2	B	698	711	Right-handed alpha
Helix 66	AH3	B	727	741	Right-handed alpha

There are 14 sheets in PDB entry 5I0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	45	first strand
Strand 2	A	31	36	anti-parallel
Strand 3	A	18	28	anti-parallel
Strand 4	A	10	15	anti-parallel
Strand 5	A	54	56	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	96	first strand
Strand 2	A	99	103	anti-parallel
Strand 3	A	630	637	parallel
Strand 4	A	151	156	parallel
Strand 5	A	428	434	parallel
Strand 6	A	222	229	anti-parallel
Strand 7	A	235	243	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	209	212	first strand
Strand 2	A	215	219	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	343	first strand
Strand 2	A	347	349	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	380	first strand
Strand 2	A	383	388	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	535	first strand
Strand 2	A	543	548	anti-parallel
Strand 3	A	551	556	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	675	678	first strand
Strand 2	A	723	726	anti-parallel
Strand 3	A	717	719	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	43	first strand
Strand 2	B	33	36	anti-parallel
Strand 3	B	18	24	anti-parallel
Strand 4	B	10	15	anti-parallel
Strand 5	B	54	56	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	96	first strand
Strand 2	B	99	103	anti-parallel
Strand 3	B	630	637	parallel
Strand 4	B	151	156	parallel
Strand 5	B	428	434	parallel
Strand 6	B	222	229	anti-parallel
Strand 7	B	235	243	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	212	first strand
Strand 2	B	215	219	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	343	first strand
Strand 2	B	347	349	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	380	first strand
Strand 2	B	383	388	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	535	first strand
Strand 2	B	543	548	anti-parallel
Strand 3	B	551	556	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	675	678	first strand
Strand 2	B	723	726	anti-parallel
Strand 3	B	717	719	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5I0H

Analysis of interatomic Contacts of Structural Units in PDB entry:
5I0H