Analysis of interatomic Contacts of Structural Units in PDB entry:
5I0K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5I0K entry

There is 1 chain in PDB entry 5I0K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 926	VAL 1216

There are 7 helices in PDB entry 5I0K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	955	959	Right-handed 310
Helix 2	AA2	A	968	984	Right-handed alpha
Helix 3	AA3	A	1071	1083	Right-handed alpha
Helix 4	AA4	A	1087	1091	Right-handed 310
Helix 5	AA5	A	1111	1116	Right-handed alpha
Helix 6	AA6	A	1124	1133	Right-handed alpha
Helix 7	AA7	A	1134	1138	Right-handed 310

There is 1 sheet (AA1) in PDB entry 5I0K.

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	933	936	first strand
Strand 2	A	943	949	anti-parallel
Strand 3	A	1009	1017	anti-parallel
Strand 4	A	1021	1030	anti-parallel
Strand 5	A	1034	1045	anti-parallel
Strand 6	A	992	999	anti-parallel
Strand 7	A	1162	1171	anti-parallel
Strand 8	A	1205	1215	anti-parallel
Strand 9	A	1194	1199	anti-parallel
Strand 10	A	1180	1185	anti-parallel
Strand 11	A	1104	1108	anti-parallel
Strand 12	A	1093	1098	anti-parallel
Strand 13	A	1068	1070	anti-parallel

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5I0K

Analysis of interatomic Contacts of Structural Units in PDB entry:
5I0K